Colletes gigas: 122404704
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Entry
122404704 CDS
T07492
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
cgig
Colletes gigas
Pathway
cgig04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122404704
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgig01009
]
122404704
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgig04131
]
122404704
03029 Mitochondrial biogenesis [BR:
cgig03029
]
122404704
Protein phosphatases and associated proteins [BR:
cgig01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122404704
Membrane trafficking [BR:
cgig04131
]
Autophagy
Autophagosome formation proteins
ULK complex
122404704
Mitochondrial biogenesis [BR:
cgig03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
122404704
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG17_like
ATG11
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
122404704
NCBI-ProteinID:
XP_043264835
LinkDB
All DBs
Position
Unknown
AA seq
1412 aa
AA seq
DB search
MLYIFHVDTGTTITFDIKLALQTVSQLNEAIERECGVHSAHQVLLMSGGESLELNTRVCS
YSAGTDTNPIYLFNKAAIESHQPPAPSIDYGSEKTGDHQKDVDLQSQIDASLAMPATYQT
LVARAQLAQQCCALAREQTRICERLVHDQHLQQQGWAAVVANLEDITQMFQSRADLLQQS
FAAYLSERQQHLELLENFNADLGMLAKIPILPALRAQAEGLLSPDDQPSQSEKDSEGREE
VLSLLRWISAKDNQSSLEQVAEQCSRGLEQFDEKMMEALKVEVNATIDHANKQDMKEIKG
LGERLFALEQLMVQTKKLVHEQGELAQSFHKNQSRANNLGDASVLPDLCTSHRHQLIVML
QNHNQLRDIRRRCTKAKEELSVNIYHRLKWIMYVENKMMEINGKLVMYHESLKRLRRHLE
VLQQIHLAPQMYMNAVAEVVRRRTFSQAFLVWASNLACQLLTVHSEELARRREFQSKFDG
HFLNSLFPGLEDTPPPFATQAPSVFDGGLPKLTTDDMESLKSQLPDLALTVSSPDLNSIT
QFFLSKSLTEASTDGNKEKDSTSMRVDAAAKEQGRTRGPMSSDRGGFESETDTEEFEKIG
QAATDSKPESFDGTKEMRQKQMEVGASRSVSPASSTSTNVSSLNSKVADLTNRSSSSSEP
GSFHFPSLSISERPAQLSPLTECAENGESSCLLHRGTNGLPKYCDLPSTSMPEEPISLSP
NPSSLTRPVMCDGQQQQRHQSSSGGSSPSVGVGATDFMGTEYYMDESLPSSLSEHPVDGQ
HQAIVSLLQENLDNTCEEVERLRSILKTMKAVVCEALTSIRQELAVLRDRSGEDKNDLSE
MTQRVHEALSLYSRECDRRLREREQELTVDHELEMSDMKKLIQGREEEICTLKRSLLEKE
TELADHERLIATMRQKLEAEQAEMRNFQTRLHRQLEDVLEEARGEKQAAVDKANDENFVE
IVSLNKSVIQCQKRIEELEESLDTARSDQDRIVKEVTNKLEMEYKAELETLKNRLKPMAA
STMETSSTDSRLEKIERQNAIELASQLLSQTNEDLKLEHPVAMHSTMDKERSDCVVKLDL
ELQLARQVVVEKDREVEMYKMREVALAEECKRYKNMVRRLTGFENMKNISTEPGLYQESS
DEGLEISQSSQDEGLKNLEPKKEEIEVSESKKVRLEKSNDASSLFKKLEILENDNKRLNA
ELQLLRESKESSEAKVEALKSEKLRSEIELFTERPRKNFAAPKSLISSVSREKEMNASVA
VVPWRDESLSPEPNRPCSCKTCFFSRGQKKMKKLASKLAAEGRITAVSCNPGDIVFVFWD
PIHGNYTLYQESSTFYFLTSDCFAELDLGLNPDGTPKSIQTIAKVVDKEFCHARRSENRY
NVPRGTKFYQVRVKAVSNSADLFASSQQQQQQ
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atgctgtacattttccacgtggacacgggcaccaccatcaccttcgacatcaagttggct
ctgcagactgtctcccagctgaatgaggcgatcgagcgagaatgcggcgtgcactcggcg
caccaggtgctcctgatgagcggaggcgaaagcctggaactgaacacgcgtgtgtgctcc
tactcggccggaaccgacacgaatccgatctatttgttcaacaaggccgccattgagagt
caccaaccacccgcgccgagcatagattatggttccgaaaaaacaggagatcatcagaag
gacgtcgatctgcagagtcaaatcgatgcgtcgctggcgatgccagccacttaccagacc
ctcgttgcccgagctcaattggcccagcagtgttgcgcgttggcacgggagcaaaccagg
atctgcgagaggctggtgcacgatcaacacctccagcaacagggctgggccgccgtggtg
gcgaatctggaggacatcacgcagatgttccagtcgcgggccgatcttctccaacagagc
ttcgccgcctacctttcggagagacagcagcacctggagctgctcgagaatttcaacgct
gatctgggcatgctcgcgaagattccgatcctgccagcgttacgcgctcaagcggagggc
ctcttgagcccggacgaccaaccgagtcaatccgagaaggattcggagggcagggaggag
gttctgagcttgcttcgatggatctcggcgaaggacaatcagagcagcctggagcaggtg
gcggagcagtgttcacggggtctggagcagttcgacgagaagatgatggaggcactgaag
gtcgaggtgaacgcgacgatagatcacgcgaacaagcaggacatgaaggagatcaagggc
ctcggtgaacggttgttcgcgctggagcaactgatggtgcagaccaagaagctcgttcac
gagcagggggagttggcccagagtttccacaagaatcaaagtcgagcgaacaacttgggg
gacgcgagcgtgctgcccgatctctgcacgtcccacagacaccagctgatcgtgatgctg
cagaatcacaatcagctgcgcgacatacgtcgcaggtgcaccaaggcgaaggaggagcta
tccgtgaacatctaccatcggctgaagtggataatgtacgtggagaacaagatgatggag
ataaacgggaagctcgtcatgtaccacgaaagtctgaagcgtctgagaaggcacctcgag
gtgctccagcagatccatctcgcgccgcagatgtacatgaacgcggtggcggaggtcgtg
cgaaggcgcaccttctcccaggctttcctcgtttgggcgagcaacctggcctgccaactg
ctcaccgttcacagcgaggagctcgcccgtcgaagggagttccagagcaaattcgacgga
cacttcttgaactcgctgttccccggcctcgaggacacgccgccacctttcgcgacccaa
gcaccgtccgttttcgacggtggattgccaaagttgacgacggacgacatggagtccctg
aaatcccagctgcccgatttggcgctcaccgtctcgtctccggatttgaacagcatcacg
cagttctttttgtccaagagcctcaccgaggccagcacagatggaaacaaggagaaagat
agtacttccatgcgcgttgacgcagctgccaaggaacagggacgaacaagaggtccaatg
tcgtccgacaggggtggtttcgagtcggagacggacacggaagagttcgagaagatcggc
caggccgccacggactcgaaaccagagtcgttcgacggcacgaaagaaatgcgccagaag
caaatggaggttggtgcctcgcgaagcgtgtcccctgcttcctcgacctcaactaacgtg
tcctcgctaaattcgaaagtcgcggacctgacgaaccggtcatcctcctctagcgagccc
ggatccttccatttccccagtttgtccatcagcgagcgtccggctcagctgagtccgctc
accgagtgcgccgagaacggcgagtcgagctgtttgcttcaccgcggcacgaacggtctt
cccaaatattgcgacctgccatccacctcgatgcccgaggaaccgatatccctaagtccg
aatccttcctccttgacacgacctgtgatgtgcgacggccagcagcaacaacgccaccag
tccagcagtggcggtagcagcccctccgtcggagtaggcgctaccgacttcatgggtact
gagtattacatggacgagtctctgccgagcagtctcagcgagcatcccgtcgacggccaa
catcaggctatcgtttcccttctccaggagaatcttgacaacacttgcgaggaagtcgag
aggctccgttccattctgaagacgatgaaagctgtcgtctgcgaggcgctgacctcgatc
cgccaggaactcgctgttctgagagatcgatccggcgaggacaagaacgatctgtcggag
atgacccaacgcgtacacgaggccttgtcgttgtactcgcgcgagtgcgatcgtcgtctt
cgtgaacgcgaacaggagctcacggtggaccacgagctcgagatgtccgacatgaagaaa
ctgatacagggccgggaggaggagatctgcacgttgaagcgtagcctgctggagaaggag
acagagctggctgaccacgagcgtctgatcgccaccatgcgtcagaaactggaggcggag
caagcagagatgaggaacttccagacgcgtttgcatcgtcagctggaggacgtgctggaa
gaggcgcgtggcgagaaacaggccgcggtcgacaaggcgaacgacgagaatttcgtggag
atcgtgtctctgaacaagtccgtcattcagtgccagaaacggatcgaagagctcgaggag
agtttggacacggctcgcagcgaccaggacagaatcgtcaaggaggtcaccaacaagctg
gagatggaatacaaggctgagctggagaccctcaagaaccggttgaagccgatggctgcg
tccaccatggagaccagctccaccgactccagactcgagaagatcgaaagacagaatgcc
atcgagctggccagccagttgctgtcccagacgaacgaggacctcaaactggagcatccc
gtcgcgatgcattcgaccatggacaaagaaagatcagattgcgtcgtgaagctggatctc
gagttgcagttggccagacaggtggtcgtcgagaaggaccgcgaggtggagatgtacaaa
atgagagaggtcgcgctcgccgaagaatgcaaacgttacaagaacatggtgaggcggttg
accggattcgagaacatgaagaacatctcgaccgagcctggattgtaccaggagtccagc
gacgagggattagaaatcagtcagagcagccaggacgaagggttgaagaatctggagcct
aagaaggaggagatcgaggtgtcggagtcgaagaaagttcggctggagaagagcaacgat
gctagtagcctgttcaagaagctcgagatcctcgagaatgacaacaagaggttgaacgca
gagttgcagttgcttcgtgagagcaaggagtcgtcggaggcgaaggtggaggctctgaaa
tcggagaaactccgttcggagatcgagctgttcacggaaaggcccaggaagaatttcgct
gctcccaagtcgttgatctcctcggtcagtcgcgagaaagaaatgaacgcttccgtcgcc
gtggtcccgtggagggacgagtcgctcagcccggagcccaatcggccctgtagctgcaag
acttgcttcttctcgcgcggccaaaagaagatgaagaaactagcgtcgaagctggcggcg
gagggtcgcatcacggcggtcagctgcaacccgggcgacatcgtgttcgtgttctgggat
ccgatacacggcaactacacgctgtatcaggagtcgtcgaccttctatttcctcacctcg
gactgctttgctgaactggacctgggcttgaatcccgacgggacaccgaaaagtattcag
accatcgcgaaggttgtcgacaaggagttctgtcatgctaggaggtcggagaaccggtac
aacgtgccacgcggcaccaagttctatcaggtgcgcgtgaaggcggtgagcaatagcgcg
gatctgtttgcgagcagtcagcagcagcagcaacagtaa
DBGET
integrated database retrieval system
