Colletes gigas: 122404912
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Entry
122404912 CDS
T07492
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
cgig
Colletes gigas
Pathway
cgig03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122404912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgig03021
]
122404912
03036 Chromosome and associated proteins [BR:
cgig03036
]
122404912
Transcription machinery [BR:
cgig03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122404912
Coactivators
SAGA/TFTC/STAGA complex
122404912
Chromosome and associated proteins [BR:
cgig03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
122404912
STAGA complex
122404912
TFTC complex
122404912
SAGA complex
122404912
SLIK complex
122404912
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIIA
Histone
OapC
DDHD
eIF-3_zeta
TERB2
VPS13_N
Presenilin
Motif
Other DBs
NCBI-GeneID:
122404912
NCBI-ProteinID:
XP_043265222
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MECNDXNNLRMNESESVYGTTLSQESIKVIAESIGVGNFPDEAAKDLAEDVSYRLKEIIQ
DAAKFMRHGKRQRMTTHDIDHALKIKNIEPTYGFFAKDHVPFRFASGGGRELHFVEEKEI
DLNEVISMSGGQTWPKLPLEITLRAHWLCIDGVQPTIPENPPPVSKDVQKLESVDPTSKL
SNKSQNIGVGKPGGGGKSQKLRNVETVHVKQLATHELSVEQQLYYKEITEACVGSDEARR
AEALQSLSADPGLHEMLARMCTFIAEGVRVNVVQNHLALLIYLMRMVKALLDNPSLYLEK
YLHELIPSIATCIVSRQLCMRPEGDNHWALRDFASRLMAQICKNFNTSTNNVQTRVTRMF
SQALAKNSQTPLASLYGAIEGLCELGPEVIKALVIPKIKSISERIESCIEGPGLSSVDKN
GAGHIKTLLVKSVAPVLKTVRSPPDYVEDYKQDYGYIGPALCAAVAKARTQPATLATTAS
TTTSLTTSQQGPTCAGKTIVQAVTSSSPGQQTGRTIMLGTSRTTGGTTTSGGQKFVILQS
RSQTPTTSNINTSALQQQQQQQQQQQQQQQQQQSQSQQQQQQQQQQQQQQQQQQQVKIAQ
TNVGQQKTHIQSSAPKLVVVCMSSGSHSTTTVTQGNITTKAQNVFVSQQSVECSLSPEEE
QHSFQC
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggaatgcaacgattaaaataatcttagaatgaatgaaagcgagtccgtttatgggact
acgttgtctcaggaatcgataaaagtaattgcggaaagtataggtgttggaaatttccct
gacgaagctgctaaagatcttgccgaggacgtaagctacagactcaaggaaattatacag
gatgctgccaagttcatgagacacggcaaacgtcagcgtatgacgacccatgatatagac
catgccctaaaaattaagaatatcgaacctacttatggattttttgccaaggatcacgta
ccgttccgttttgcttctggcggtggtcgagaactacattttgtagaagaaaaagaaatt
gatctcaatgaagttatatctatgtctggtggacaaacgtggcccaagttacctttagaa
attacgctgcgtgcccattggctttgtatagacggtgttcaaccgacgataccagagaat
ccgcctccggtctctaaagacgttcaaaaactagagagtgtcgatccaaccagtaaacta
tcgaacaagagtcaaaacatcggtgttggaaaaccaggaggcggaggaaagagtcagaaa
ttacgtaatgtggaaaccgttcatgttaagcagttagcgactcacgaattgagcgtcgaa
caacaattgtattacaaagaaattacggaagcttgtgttggatcggacgaagcacgcaga
gcagaggcacttcaatcgctttctgctgatcctggtttacatgaaatgttggcgcgaatg
tgcaccttcatcgcggaaggtgtccgcgttaatgtagtacaaaatcatcttgcgcttctt
atttatcttatgcgaatggttaaagctcttctggataatcctagcctttacctagaaaaa
tacttgcatgaattgataccgtctatcgcaacttgtatagtgtcgcggcaattatgtatg
agaccagagggtgacaatcattgggcgttacgtgatttcgcttcgcgccttatggctcaa
atttgtaaaaatttcaatacctctacgaataacgtacaaaccagagtaaccagaatgttt
agccaagcattggctaaaaacagtcagaccccattggcatccctttacggtgcgatcgag
ggattatgcgagttaggtccggaagtaattaaggcgttagttattcctaaaattaaatcg
atttcggaacgtatcgaatcgtgcatcgaaggaccaggtttgtcgagtgtggataaaaat
ggagcaggtcatataaaaaccttactcgtgaaatcagttgctcctgttttgaaaactgtc
cgatctccgccggattacgtggaagattacaaacaggattatggttacattggccccgca
ttatgtgcagcagttgcaaaggctcgtacacagccagcaacgttagcaacgactgcatcg
acgacaacgtctctaacaacgagtcaacagggtcccacgtgcgccggaaaaactattgta
caagctgtgacaagttccagccctggacaacaaactggacgtacaataatgttaggtaca
agtagaactaccggtggaactactacaagcggtggacaaaaattcgttattttgcaatca
cgatcacaaacaccgaccacttcaaacattaataccagtgcgcttcagcagcagcagcag
cagcagcagcagcaacagcagcaacaacaacaacagcaatctcagtcgcaacagcagcag
cagcagcagcagcagcagcagcagcagcaacagcagcagcaacaagttaaaatagctcaa
accaatgtcggtcaacaaaagacacatatacagagcagcgcaccgaaattggtggtcgtt
tgtatgtcaagcggtagccactcgactacgacggtaactcagggaaatataacgacaaaa
gcacagaatgtttttgtgtcccaacaaagtgttgaatgctccctaagcccagaagaagaa
caacattcttttcagtgctag
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