Colletes gigas: 122404955
Help
Entry
122404955 CDS
T07492
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
cgig
Colletes gigas
Pathway
cgig03018
RNA degradation
cgig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122404955
09123 Folding, sorting and degradation
03018 RNA degradation
122404955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgig03019
]
122404955
03041 Spliceosome [BR:
cgig03041
]
122404955
Messenger RNA biogenesis [BR:
cgig03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122404955
mRNA degradation factors
5'-3' decay
Lsm complex
122404955
Spliceosome [BR:
cgig03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
122404955
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Gemin6
Motif
Other DBs
NCBI-GeneID:
122404955
NCBI-ProteinID:
XP_043265302
LinkDB
All DBs
Position
Unknown
AA seq
113 aa
AA seq
DB search
MSVAKQQQNAHGEPKEKRRKESILDLSKYLEKNIRVKFAGGREASGILKGYDPLLNLVLD
NTTEYLRDPDDPYKLNQDTRMLGLVVCRGTSVVLICPVDGMESIQNPFIQQDG
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggcgaaacagcaacagaatgcccatggggagcccaaagaaaagaggaggaaa
gagagtattcttgatttgtccaagtatttagagaagaacattagggtaaagtttgctggg
ggtagggaggcctcaggaattcttaaggggtacgatcctctgcttaacttggtgctggat
aatactacggaatacctcagagatcccgatgatccgtataagttaaatcaagatactcgt
atgcttggcttggtcgtatgcagaggcacatctgtagtacttatctgtccagtagatgga
atggaatctattcagaacccttttatacaacaagatggttaa
DBGET
integrated database retrieval system
