Colletes gigas: 122404984
Help
Entry
122404984 CDS
T07492
Name
(RefSeq) nuclear pore complex protein Nup93
KO
K14309
nuclear pore complex protein Nup93
Organism
cgig
Colletes gigas
Pathway
cgig03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122404984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgig03019
]
122404984
Messenger RNA biogenesis [BR:
cgig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122404984
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
TPR_14
SpxO
Motif
Other DBs
NCBI-GeneID:
122404984
NCBI-ProteinID:
XP_043265361
LinkDB
All DBs
Position
Unknown
AA seq
827 aa
AA seq
DB search
MGNFTNFDMFTTNSSRVTRDPGFSELLRSAEQLSAAVEGNEELPQVQRNLRQILEASNEL
WSRVTQTGTQDNQVQAHLLLGSRGVDLPQISQKLSSLSARRTFEPLDPIADTDIVSYLRN
EKENAILSIIEQVHKDTFELTRVQQMEHMLGEWKQMRYEIINGMTGPSGDLVNLSGTPQR
TKLAGSMISGLSSVEVAYAKELQNYNKHIRERMTKPSLFDAFCKAAESFNDKKIVDMWQM
VQYMVDIPPIPKKDQIKSRSTPIVEKKIILQARKYLENRYRDFMTSVISENLAMAKRGGI
PGTVPLVKSFVSIKVQNVRDLEDTVVENKPLWPLVYYCMRLGDYKAALTCLNECNTEFPE
FKAALEGACNDPDRHPNSYAESNLKLQYRKHVRSVTDPYKRVAYCALVPCEPDDLHSDII
STADDYLWLKLCQVRDQPDSENKLTLDYLQTTISEIYGESYYHAHEQPFVYFSMLFLTGQ
FEAAIEFLARGAGAKHLPHAVHLAAAMHEHNFLGVSQSVLAPLLSVDPADKPPAKRLNFA
RLILLYVRRFDTTDPKECVNYLFLLRSMKDPHDRNMFAVSAAEMVVEASPANKIQLVGKI
DKNHWGPGILDQFLLNKEDVVNISADTLYRKGLLEDSVTMYDLVGNYEKVLNLMCTLLAQ
VVSQKVSPGSLRSRLQVTATQLSTRYVGNQIHAPSKLMSAFQTLRHLMVFFDQFHNEQYQ
SALRTIAESKLLPLHIKEVDERVNALRRVSPEVAGTLADVLLATMTILYRQYQKLRSTEP
GDEEARKQQLLDLREQARALTSFAGTLPYRMPNETNSKLVQMEILMC
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgggcaattttacgaacttcgacatgttcaccacgaattcttcacgagtgacaagggat
cccggttttagtgaattattgcgttcggcggaacaattgtccgctgccgtagaaggaaac
gaagaacttcctcaagttcagagaaaccttcgtcaaatcttagaagcatctaacgaactt
tggtctcgtgtcacacaaaccggcactcaagataatcaggttcaagcgcatctcttgctt
gggtcacgtggtgttgatctgccacaaatatcacagaagttaagttcgcttagcgcaaga
cgcacgttcgaacctttagatccaatcgcagatacagatatagttagttacctcagaaat
gaaaaggaaaatgctatcttatcgatcatcgagcaagttcataaagatacttttgaactt
actagagttcaacaaatggaacatatgttgggggagtggaagcaaatgcgttatgaaata
ataaacggtatgacgggtccttccggcgacctagtgaatttaagcggaactcctcagcga
accaaattagccggttcgatgatcagtggtttgtccagcgtggaagtagcgtacgccaaa
gagttacaaaattacaacaaacatatacgcgaacgtatgaccaagccgagtctgttcgat
gcattttgtaaagctgccgagtcgtttaacgataagaaaattgtagatatgtggcaaatg
gtccagtatatggtagacattccaccgattcctaaaaaggatcaaattaaatccagaagt
actcccatagttgagaaaaaaattatattacaagctagaaaatatttggaaaatagatac
agagatttcatgacttccgttattagcgaaaacttggcaatggcgaagaggggtggcatt
ccaggcaccgtgccattagttaaaagttttgtaagcattaaagtacaaaacgttagggat
ctagaagatactgtagttgagaataaaccactgtggcctttggtctattattgtatgaga
ctcggtgattacaaagcagcgttgacgtgtctcaatgaatgcaatacagaatttccagag
ttcaaagctgcgttagaaggagcttgcaacgaccctgaccgacatcctaacagttacgcg
gaatcgaatctgaaattgcaatacaggaaacacgtcaggtcggtcacagatccgtacaaa
agagtagcatattgcgcgttggttccctgcgaaccggacgatttacattcggatataatt
agtacggccgacgattatttatggctgaaattgtgtcaagttagagatcaaccagattcg
gaaaacaaattgacgttagattatttgcaaactacgatatcggagatatatggggaatct
tattatcatgcgcatgaacaaccgtttgtgtacttttcgatgctattcttaactggtcag
ttcgaagcagcgattgaatttttggcaagaggcgcgggagcgaagcatttgccgcatgcg
gtgcatttagcggccgccatgcacgagcataacttcctaggagtcagtcaaagtgtatta
gcgccattgctgagcgtcgatccagctgataaaccacctgccaaacgattaaatttcgct
agattgatattgctgtatgtcaggaggttcgataccactgacccgaaagaatgcgtgaat
tatttattcttattaaggagtatgaaagatcctcacgatcgtaacatgttcgccgtgtca
gccgcggaaatggtagtagaagcctcaccggcaaataaaattcaattagttggaaagata
gacaagaatcattggggtccaggaattctggaccaatttttacttaacaaggaagacgtg
gtaaacatcagcgcggatacattgtacaggaaaggtcttttagaagactctgtaacgatg
tacgatctcgttggtaattacgagaaggttcttaatctaatgtgcacccttctggcgcaa
gtcgttagtcaaaaagtttcaccggggtcgttgagatcgcgactgcaagtcactgctacc
caactaagcacaaggtatgtaggtaaccagatacacgcaccgtccaaattaatgtctgcg
tttcaaactttgagacatttgatggtgttttttgatcagtttcataacgaacaatatcag
agtgctcttaggactattgccgaatcaaagttgttgccattgcatataaaagaagtcgac
gagagggtgaatgcattgcgtcgcgtgtcgcccgaagtagctggtacgttagcggacgtc
cttctggcgacaatgacgatactttatcgtcaatatcaaaagttacggtcgacggaaccg
ggcgacgaagaagcaaggaagcaacaattactcgatcttcgggaacaggcgcgcgcatta
acgagtttcgcgggtacactcccgtaccgtatgccaaacgaaacgaacagtaaactcgta
caaatggagatccttatgtgttga
DBGET
integrated database retrieval system
