Colletes gigas: 122405102
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Entry
122405102 CDS
T07492
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
cgig
Colletes gigas
Pathway
cgig03018
RNA degradation
cgig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122405102
09123 Folding, sorting and degradation
03018 RNA degradation
122405102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgig03019
]
122405102
03041 Spliceosome [BR:
cgig03041
]
122405102
Messenger RNA biogenesis [BR:
cgig03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122405102
mRNA degradation factors
5'-3' decay
Lsm complex
122405102
Spliceosome [BR:
cgig03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
122405102
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
122405102
NCBI-ProteinID:
XP_043265547
LinkDB
All DBs
Position
Unknown
AA seq
79 aa
AA seq
DB search
MSRKEALSQFIQQIHGRPVVVKLNSGIDYRGVLACLDGYMNIALEQTEEYVNGQLKDKYG
DAFIRGNNVLYISTQKRKT
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcaaggaagcattatcccaatttattcaacagattcatggccgtcccgttgtt
gtgaagttaaatagcggaatagattatagaggtgttttagcatgtctcgatggttacatg
aatatagcacttgaacaaacggaagaatatgtgaatggtcaattaaaagacaaatatggt
gatgcttttatacgtggtaataatgtattatatattagcacacaaaaacgtaaaacttga
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