Colletes gigas: 122405436
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Entry
122405436 CDS
T07492
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
cgig
Colletes gigas
Pathway
cgig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122405436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgig03041
]
122405436
Spliceosome [BR:
cgig03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
122405436
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
122405436
NCBI-ProteinID:
XP_043266110
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MATKRQEYQQKRKFVENQSDTDEETEKGIKVAKTNAEAPRLCPYLDTINRQFLDFDFEKL
CSVSLSRINVYACLVCGKYFQGRGTNTHAYTHSVAESHHVFLNLHTLKFYCLPDNYEIID
SSLDDIKYVLNPTFDKTQITLLDKSDKLSRAIDGSLYSPGIVGMNNIKANDYCNVILQAL
SHVTPLRDFFLRESNYSHVKRPPGDSSYLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAV
VLWSKKRFQFTEQGDPIDFLSWFMNALHLALNGTKKRDSSIVYKTFLGHMRIYTRKIPPL
ELDENQRSELLHTVEYGQTVTESPFLYLTCDLPPPPLFKDQFTENIIPQVNLYTLLNKFN
AVTEKEYKTYKENFMKRFEITELPPYLILYIKRFTKNTFFVEKNPTIVNFPVKNVDFGDI
LTPEVKQRHPYTTYDLVANIVHDGEPGQGTYRVHILHRATGQWYELQDLHVTQILPQMIT
LTEAYIQIYELKKDIQTENGENKSKKTI
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaagaggcaagagtatcaacaaaaacggaaatttgtagaaaatcaaagtgat
acagatgaagaaactgaaaaaggtattaaagttgccaaaacaaatgcagaagcaccacga
ctgtgcccttacttggacacaataaatcgtcagtttttagattttgattttgaaaaatta
tgttcagtatcattgtcaagaattaatgtatatgcttgtcttgtatgtggaaagtatttc
caaggtagaggtaccaatactcatgcatatacacacagtgtagcagaaagtcatcatgta
tttcttaatcttcataccttaaaattttattgtttacctgacaattatgaaatcatcgat
tcatcgctagatgacattaaatatgttttaaatccaacatttgataaaactcaaattaca
ttattggacaaaagtgataaattatcaagagctattgacggttcattatattctccaggt
attgtgggaatgaataatattaaagcaaatgattactgcaatgttattttacaagcactt
tcgcacgttacgcctttaagggacttctttttaagggagtctaattattctcatgtgaaa
aggccacctggtgattcttcctatcttttggtccaaagatttggagaattaatgagaaaa
ttgtggaatccacgtaactttaaagcacacgtcagcccccatgaaatgttacaagctgtt
gtcttatggagtaaaaaaagattccaatttacagagcagggtgatccaattgattttctt
tcatggtttatgaatgctcttcatttagcattaaatggtacaaaaaaacgagattctagt
atagtgtacaaaacatttttgggtcatatgcgtatatatacacgaaaaataccgccgctc
gaattagacgaaaatcaaagaagcgaattgcttcatactgtagaatatggtcaaactgta
acagaaagtccgtttttatatttaacatgcgatcttcctccaccgcctctctttaaagat
caatttaccgaaaatatcattccccaagtcaatttatatacattattaaataaatttaat
gctgtaactgaaaaagaatataaaacctacaaggagaattttatgaaaagatttgaaatt
acagaacttcctccttatcttatactgtacataaaaagatttacaaaaaatacgttcttt
gtagagaaaaatcctactatagttaatttcccagttaaaaacgtagattttggagacatt
ttgacacctgaagtgaagcaacggcatccttatacgacgtacgatttagttgcaaatata
gttcacgatggcgaacccggtcaaggaacgtacagagttcatattttacacagagcaact
ggtcagtggtacgaattacaagatttacatgtcactcaaattttgccccagatgataaca
ttaacggaagcatatatacaaatttatgaattgaaaaaagatatacaaacagagaatggt
gaaaataaaagtaaaaagacaatatga
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