Castellaniella ginsengisoli: ABRZ00_01715
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Entry
ABRZ00_01715 CDS
T10938
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
cgin Castellaniella ginsengisoli
Pathway
cgin03030
DNA replication
cgin03430
Mismatch repair
cgin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cgin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABRZ00_01715 (holA)
03430 Mismatch repair
ABRZ00_01715 (holA)
03440 Homologous recombination
ABRZ00_01715 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgin03032
]
ABRZ00_01715 (holA)
03400 DNA repair and recombination proteins [BR:
cgin03400
]
ABRZ00_01715 (holA)
Enzymes [BR:
cgin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABRZ00_01715 (holA)
DNA replication proteins [BR:
cgin03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABRZ00_01715 (holA)
DNA repair and recombination proteins [BR:
cgin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABRZ00_01715 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
XDJ55925
UniProt:
A0AB39E3N0
LinkDB
All DBs
Position
351885..352934
Genome browser
AA seq
349 aa
AA seq
DB search
MARASAADRLTEHYAGASELPACTVLSGDEILLLTEAADAYRAAAVRLGCVERTHLVMDA
RSDWGTALAASQNASLFGDLRLLEISLPTGKPGKTGADTLQKLAAMAGEGQLPDVRILIR
LPQLDRTTQQAKWVQSLKSRAAWTDIPSIPRAALTDWIAARLERQQHTADAETLAWLADK
VEGNLLAAHQELQKLALLHPAGPLSLEQVQAAVLNVARYNLYDLRDAMLLGQADRALTVL
RGLQAEGEALPLVLWAIGEEIRILARLAPHARSGLDAAIRSQRLFGAREKLARQALARVP
ASAWPPALRHAHEIDRIIKGIPVDGLLRDPWDELERLVMRMATAGSPRR
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgcatcggcagccgaccgcctgaccgagcactacgctggcgcctcggaactg
ccggcctgcacggtgctgagcggcgacgagattctcttgctgaccgaggcggccgacgcc
taccgcgccgccgccgtccggctgggctgcgtcgagcgcacccacctggtgatggacgcc
cgcagcgactggggcacggcgctggctgcctcgcagaacgcctccctgttcggcgacctg
cgtctcctggagatcagcctgcccaccggcaagccgggcaagaccggagccgacaccttg
cagaaactggccgccatggccggcgaaggccagttgccggatgtgcggatcctgatccgc
ctgccgcaactggaccggaccacccagcaagccaaatgggtccagtccctgaagtcccgc
gccgcctggacggacattccttccatcccgcgcgcggcgctcacggactggatcgccgcc
cgcctggaacgccagcagcacaccgccgatgccgaaacgctggcctggctggccgacaag
gtcgaaggcaatctgctggcggcccaccaggaattgcagaaactcgccctgctgcatccg
gccggaccgctcagcctggaacaagtccaggccgccgtgctgaacgtggcccgctacaat
ctctatgatctgcgcgatgccatgctgctgggccaggcggatcgagcgctgaccgtgctg
cgggggctgcaggccgaaggcgaggccctgccgctggtgctctgggccatcggcgaggaa
atccgcatcctggcgcgcctggcgccccacgcccgcagcggcctggatgcggcgatacgg
tcccagcgcctgttcggcgcgcgcgaaaaactggcgcgccaggcgctggcccgcgtgccc
gcctcagcctggccgccggccctgcgccacgcccacgagatcgaccgcatcatcaagggc
atcccagtggacggcctgctccgggatccctgggacgaactggaacgcctggtgatgcgc
atggccaccgcgggatcgcctcgccgatga
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