KEGG   Castellaniella ginsengisoli: ABRZ00_01935
Entry
ABRZ00_01935      CDS       T10938                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
cgin  Castellaniella ginsengisoli
Pathway
cgin03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cgin00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    ABRZ00_01935 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgin03019]
    ABRZ00_01935 (rnc)
   03009 Ribosome biogenesis [BR:cgin03009]
    ABRZ00_01935 (rnc)
   03036 Chromosome and associated proteins [BR:cgin03036]
    ABRZ00_01935 (rnc)
Enzymes [BR:cgin01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     ABRZ00_01935 (rnc)
Messenger RNA biogenesis [BR:cgin03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ABRZ00_01935 (rnc)
Ribosome biogenesis [BR:cgin03009]
 Eukaryotic type
  90S particles
   RNase
    ABRZ00_01935 (rnc)
 Prokaryotic type
  rRNA processing factors
   ABRZ00_01935 (rnc)
Chromosome and associated proteins [BR:cgin03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     ABRZ00_01935 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DND1_DSRM
Other DBs
NCBI-ProteinID: XDJ55967
UniProt: A0AB39CSA8
LinkDB
Position
complement(399229..400017)
AA seq 262 aa
MASLDSLQAALDYRFRDGGLLERALTHRSHGMPHNERLEFLGDSVLNFVVSTLLFAEHAE
MDEGDLSRVRSNLVKQSALADIAQTLSLSVHLRLGEGELKSGGFRRPSILADALEAIFGA
IYLDGGYPEISRVIERLYRPVLAHIDLRTFGKDPKTLLQELVQGRGHPLPRYEVLATRGA
AHDQLFDVVCEIAPLGIREQASGTSRRAAEQAAASQAIAAIEALGPARRAARRRKPAQLS
LPVAVAQDGAQSKTRNTPQDKT
NT seq 789 nt   +upstreamnt  +downstreamnt
atggcctccctggattccctgcaggctgccctggactaccgttttcgggacggcggcctg
ctggagcgggcgctgacccatcgcagccatggcatgccgcacaacgagcgccttgagttc
ctcggggattcggtgctgaatttcgtcgtgtccacgctcttgttcgccgagcacgccgaa
atggacgaaggcgatctgtcgcgggtgcgttccaacctggtcaagcagtccgctctggcc
gacatcgcccagaccttgtccctgtcggtccatctgcgtctgggcgaaggcgagctgaag
agcggcggtttccgccggccctcgatcctggccgacgcgctggaagccatcttcggcgcc
atctacctggacggcggctatccggaaatcagccgcgtcatcgagcgcctgtaccgcccg
gttctggcgcatatcgacttgcgcacgttcggcaaggatcccaagaccctgctgcaggaa
ctcgtccagggacgcggccatcccctgccgcgctacgaggttctggccacgcgcggcgcg
gcgcacgaccaactgttcgatgtggtttgcgagatcgcgccgctcggcatccgcgaacag
gcgtccggcaccagccggcgggcggccgagcaggccgccgccagccaggcgatcgccgcc
atcgaagccctggggccggcgcgccgggcggcgcgccgccgcaaaccggcccagttgtcc
ctgcccgtggccgtggcccaggacggcgcccagagcaagacccggaatacgccccaggat
aagacatga

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