Castellaniella ginsengisoli: ABRZ00_02825
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Entry
ABRZ00_02825 CDS
T10938
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
cgin Castellaniella ginsengisoli
Pathway
cgin03030
DNA replication
cgin03430
Mismatch repair
cgin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cgin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABRZ00_02825 (dnaX)
03430 Mismatch repair
ABRZ00_02825 (dnaX)
03440 Homologous recombination
ABRZ00_02825 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgin03032
]
ABRZ00_02825 (dnaX)
03400 DNA repair and recombination proteins [BR:
cgin03400
]
ABRZ00_02825 (dnaX)
Enzymes [BR:
cgin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABRZ00_02825 (dnaX)
DNA replication proteins [BR:
cgin03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABRZ00_02825 (dnaX)
DNA repair and recombination proteins [BR:
cgin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABRZ00_02825 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
DNA_pol3_tau_5
AAA_22
RuvB_N
AAA_14
AAA_18
AAA_2
AAA_5
AAA_16
TsaE
AAA_19
AAA_28
nSTAND3
Mg_chelatase
ABC_tran
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
XDJ56130
UniProt:
A0AB39DQX3
LinkDB
All DBs
Position
complement(601366..603333)
Genome browser
AA seq
655 aa
AA seq
DB search
MSYLVLARKWRPRSFDTLIGQDHVVRALTHALSSGRLHHAWLFTGTRGVGKTTLSRILAK
SLNCIQGVSATPCGQCQACTEIDAGRYVDYIELDAASNRGVDEMTQLLEQAVYAPSSGRF
KVYMIDEVHMLTGHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNLKQMTV
PAIVDHLQDILARESVPADPRGLRLIAQAAAGSMRDALSLTDQAISFSAGDLTAAAVGEM
LGTLDQHHLLSLLRALAAADAPAILAVADDLAARGLSFQAALGDLAVLLSRVAIAQRLGH
AQADDPLAQAVTELAGALTPDDVQLFYAVAVHSRQELALAPDEQAGFVMACLRMLALLPE
GRVPPVSMAPPPALQAAPAESVQAAPETASDAALKAEPPAWESVPEPPAAAAPAVPGPVH
AAGEPAVPEAVSAVSPRPPVPAPDPDPAPDRDPIPDPDPAPPAPPDEAASASDDWTDAVP
DDLTEPFDAAASLGDLGLDPAASGAIAGLPAEPSASRPETPDPSRMTAQDWPAVAAALPV
GGAAQALALNSEWLSGDDHRIRLRVAIHTYADGGGHDRLRTILSEYFGRALRLDVEYGVT
GDDTAHAVDQAERAQRQQAAEQAVEQDELVRTLTRRFAARVVPGSIRPSAAPPAV
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgagctatctcgtcttggcgcgcaagtggcgcccccgttcattcgatacgctgattggc
caggatcacgtggtacgtgccctgacccacgcgttgtcgtccggccggctgcatcatgcc
tggctgttcaccggcacgcgcggcgtaggcaagaccacgctgtcgcgcatcctcgccaag
tccctgaattgcatccagggcgtctccgccacgccctgcggccagtgccaggcctgcacg
gaaatcgacgcgggccgctacgtggattacatcgagctcgacgccgcttccaaccggggc
gtcgacgaaatgacccagttgctggagcaggccgtctacgcaccgtcgtccggccgcttc
aaggtctacatgatcgacgaagtccacatgctgaccgggcacgccttcaacgccatgctc
aagacgctcgaagagccgcccgagcacgtcaagttcatcctcgcgaccaccgatccgcag
aaaatcccggtgacggtgctgtcgcgctgcctgcagttcaacctgaagcagatgacggtg
cccgccatcgtcgatcacctccaggacatcctggcccgggaatccgtccccgcggatcct
cgcggcttgcgcctgatcgcccaggcggcggccggctcgatgcgcgacgcgctgtccctg
acggaccaggccatttccttttcggcgggcgacctgacggccgccgccgtgggcgagatg
ctcggcacgctggaccagcaccatttactgagcctgttgcgcgccctcgcggcggccgat
gcgcccgccattctggccgtggccgacgacctggccgcacgcggcctgtcgttccaggcg
gccctgggcgacttggccgtactgctgtcgcgggtggccatcgcccagcgcctgggccat
gcccaggccgacgatcccctggcgcaagccgtcaccgaactggccggcgccttgacgccg
gacgacgtgcagttgttctatgccgtggccgtccacagccgccaggaactcgccctggcg
cccgacgagcaggcgggcttcgtcatggcctgcctgcgcatgctggccctgttgccggaa
ggccgcgtgccgcccgtgtcgatggcgccgccgccggcgctccaggcggcgccggcggaa
tcggtccaggcggcccccgagactgcgtccgatgccgccctcaaagccgagccgcctgcc
tgggagtccgtgcccgaacccccggcggccgccgcgccggctgtgcccgggcccgtccat
gccgccggcgaaccggcggttcccgaggcggtttcggcggtttctccccggccgccggtt
cccgcccccgatccggatcccgcgcccgaccgcgatccgatccccgatcccgatcccgcc
ccgccggcgccgcccgacgaggccgcgtccgcttcggacgactggaccgatgcggtgccc
gacgatctgaccgagcctttcgacgccgccgcctcgctgggcgacctggggctggatcct
gccgcgtccggagccattgccggcctgcccgcagagccttccgcctcccggcccgaaaca
cccgatccgagccggatgacggcgcaggactggccggcggtggctgcggccctgccggtc
ggaggcgccgcgcaggcgctggcgctgaacagcgaatggctctccggcgacgatcaccgg
atcaggttgcgggtcgccatccacacgtatgcggacggcggcggccatgatcgtttgcgg
acgatcctgtccgaatatttcggccgggctttgcgcctggacgtcgaatacggcgtcacg
ggcgacgataccgcccatgccgtcgatcaggccgaacgcgcccagcgccagcaggccgcc
gagcaggcggtcgagcaggacgaactcgtccgcacgctgacgcggcgcttcgccgcccgc
gtcgtgccgggttcgatccgcccgtccgccgcgccgcctgcggtatag
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