Castellaniella ginsengisoli: ABRZ00_03380
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Entry
ABRZ00_03380 CDS
T10938
Name
(GenBank) efflux RND transporter permease subunit
KO
K07789
multidrug efflux pump
Organism
cgin Castellaniella ginsengisoli
Pathway
cgin02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cgin00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ABRZ00_03380
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgin02000
]
ABRZ00_03380
Transporters [BR:
cgin02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
ABRZ00_03380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
DUF2275
Motif
Other DBs
NCBI-ProteinID:
XDJ56227
UniProt:
A0AB39DI39
LinkDB
All DBs
Position
complement(714585..717695)
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AA seq
1036 aa
AA seq
DB search
MRFFALFLRRPVGTSLLCLALALTGALALRFLPVAPLPQVDLPMITVSASLPGASPETMA
SSVAMPLEQSLGAIAGLDSMNSRSSEGRTTIILVFELDRDINSAARDVQAAINAARPMLP
SGMRGNPTYHKVNSSSSPIMTLALTSDTATRGELYDLASTVLAQKLAQVKGVGQVTLGGS
SLPAVRVLVDPRALESMGIPLDRIRQVLQDVNALRPGGQVRRGDTQWQIRPSDQLRTAAD
YARLIVEWRDGRPVRLSDVARLEDSVEDINQVGYFNDRPAVLLLIRRQADANIIETVDAI
RALLPEFQALLPKQARLTVAQDRTPSIRASLREAELSLVLSVVLVVAVVLAFLGNWRAAL
IPAVAVPVSLISTFSAMWWFGFTLNTISLMALIVATGFVVDDAIVVLENIMRHIERGMRP
ARAALSGVAEVGFTVLAMSVSLIVVFSPLWLVGGLVGRLFKEFAVTLSVAIAVSLLVSVT
LTPVMAARLLRAPAGHEAPPGGLLRRGLRRFGRASEAAYQRSLRWSLDHGRLVLLMLLAT
VGLNVYLYASIPKGFFPQQDTGQLMGFFRVDTGTSFGETQVRLDAFRRVLLADPAVETVT
AYAGGRGGSNSSFVQVELKPLSERSASAAEVVDRLRPRFEHTPGARMFLVPQQDIFVGHS
SRAGSYSYVLMGSDLALLGQWLPRVRDALAALPELVDVDDDVENKGRRVELVVDRDAARR
LGVQMTDLAGVLNNAFSQRQAAVLYGALNQYHVVMAVQPHYARDLHSLRALQVLNADGER
VPLTAFTRITEGSAPRSVNHEGLLAADSVSFGLAPGVSLDQALSAIDRAVARIGLPSQEL
QGGLDQSAGMMRDAVAQQPWMLAAALVAMYLVLGMLYESTIHPITILSTLPSAGVGALLA
LRLVGMEFTLIALIGVLLLIGIVKKNAIMMVDFALQAQHREGLDPREAIYRACLARLRPI
LMTTLSAMLGALPLLLATGAGVEMRQPLGLTIVGGLLVSQVLTLYTTPVVYLSLDRLRRN
RRRVPPAPQQEPTPHV
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgcggttctttgctctgttcttgcggcggccggtgggcacatccctgctgtgtctggcg
ctggctttgaccggggcgctggcgttgcgcttcttgccggtggctccattgccacaggtg
gatctcccgatgattacggtctcggcctcgctgccgggtgccagccccgagaccatggcc
tccagcgtggccatgcccctggaacagtcgctgggcgcgatcgcgggactggacagcatg
aattcgcgcagcagcgaaggccggaccacgattattctggtgttcgagctcgaccgcgac
atcaacagcgcggcgcgcgatgtccaggcggccatcaacgccgcgcggcccatgctgccc
tctggcatgcgcggcaaccccacctatcacaaggtgaattcttcgtcgtcgcccatcatg
acgctggcgctgacttcggatactgcgacgcgcggggagctctacgacctggcttccacc
gtgctggcgcagaaattggcgcaggtgaagggggttgggcaggtgacactggggggcagt
tcgctgcccgccgtgcgcgtcctggtcgatccgcgcgcgctggagtcgatgggaattccg
ttggaccgcatacgtcaggtgctgcaagacgtgaatgcgctgcgccccggcgggcaggtg
cgccgcggcgacactcaatggcagatccgccctagcgatcagttacgcacggcagcagac
tatgcccgcttgatcgtggaatggcgcgatggccgcccggtgcggctgagcgatgtcgcg
cgtctcgaagattcggtcgaggacatcaaccaggtcggctatttcaatgaccgccccgcc
gttctgctgctcatccgccgccaggccgatgccaacatcatcgagactgtcgatgccatc
cgtgcgttgctgccggaattccaggcgctgctgccgaagcaggcgcgcctgactgtggct
caggaccgtacgcccagtatccgggcctcgctgcgcgaggccgaactgtccctggtgctg
tcggtcgtgctggtcgtggccgtggtgctggccttcctgggcaactggcgcgccgccctg
atcccggccgtggccgtgccggtctcgctgatcagtactttcagcgcgatgtggtggttc
ggcttcaccctcaatacgatttccctgatggctttgatcgtggccaccggcttcgtcgtg
gacgacgccatcgtggtgctggaaaacatcatgcgccacatcgagcgcggcatgcgtccg
gcgcgggccgccctgagcggcgtggccgaggtcggctttacagtgctggccatgagcgtg
tctctgatcgtggtattcagccccctgtggctggtgggcggcctggtggggcggctgttc
aaggaatttgccgtcaccctgtcggtggccatcgccgtatcgctgctggtgtcggtgaca
ctgacgccggtcatggcggcgcgcctgctgcgcgcgccagccgggcacgaggcgccgccc
ggcggccttctgcggcgcgggctgcggcgcttcggccgggcaagcgaggccgcctaccaa
cggtcgctgcgctggtcgctggatcacgggcgcctcgtgctgctgatgctcctggcgacg
gtgggcttgaacgtctacctgtacgccagcattcccaaggggttcttcccgcagcaggat
acgggccaattgatgggctttttcagggtcgataccgggacgtccttcggtgagactcag
gtccggctcgatgctttccgccgcgtgttgctggccgacccggctgtggagaccgtcacc
gcctacgccggcgggcggggcggcagcaattccagctttgtccaagtggagctcaagccc
ttgagcgagcgcagcgccagcgccgccgaggtcgtcgaccggctgcggccccggttcgag
catacgcccggcgcacgcatgttcctggtgcctcagcaggacatcttcgtgggccattct
tcgcgggcgggctcttattcctacgtgctgatgggcagcgacctggccttgctgggccag
tggctgccgcgcgtgcgcgacgcactggccgcgctgcccgaactggtcgatgtggacgac
gacgtcgagaacaagggccgccgggtggaactggtcgtcgaccgggacgccgcccggcgc
ctgggggtgcagatgacggatctggcgggggtgctgaacaacgccttcagtcaacggcag
gcggccgtgctgtacggcgctttgaaccagtatcacgtcgtcatggccgtgcagccgcac
tatgcccgcgacctgcattccctgcgggctctccaggtgctcaatgccgacggcgagcgc
gttcccctgacggcctttacccgcatcaccgagggttccgcgcctcgctcggtgaatcat
gagggtctgctggcggccgattccgtgtccttcgggctggcgccgggggtctccctggac
caggctttgtcggccatcgaccgggccgtggcgcgcatagggctaccgtcgcaggaactg
cagggggggctggaccaaagcgccggcatgatgcgcgatgcggtggcgcagcagccctgg
atgctggcggcggcgctggtggccatgtatctggtgctgggcatgctgtacgaaagcacc
atccatccaatcacgatcctgtccaccttgccatcggccggtgtgggcgccctgctggcc
ttgaggttggtggggatggagttcaccctgatcgcgttgatcggtgtgcttctgctgatc
ggcatcgtcaagaaaaacgccatcatgatggtggatttcgctttgcaggcgcagcatcgc
gagggtctggatccccgtgaggccatctatcgcgcctgcctggcgcgcctgcgccccatc
ctgatgactacgctgtcggccatgctgggcgcgttgccgctgctgctggccacgggggcg
ggggtggagatgcgtcaacctctggggctgacgatcgtcggcggcctgttggtcagccag
gtgctcacgctctacactacgcccgtcgtctatctgagtctggatcgtctgcgccgcaac
cgccggcgcgtgcctccagcgccgcaacaggaacccaccccccatgtttga
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