Castellaniella ginsengisoli: ABRZ00_03695
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Entry
ABRZ00_03695 CDS
T10938
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cgin Castellaniella ginsengisoli
Brite
KEGG Orthology (KO) [BR:
cgin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgin03009
]
ABRZ00_03695 (rimO)
Enzymes [BR:
cgin01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ABRZ00_03695 (rimO)
Ribosome biogenesis [BR:
cgin03009
]
Prokaryotic type
ribosomal protein modification factors
ABRZ00_03695 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
XDJ56285
UniProt:
A0AB39DQD8
LinkDB
All DBs
Position
complement(781306..782628)
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AA seq
440 aa
AA seq
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MSQSPRVGFVSLGCPKALVDSERILTQLRTDGYTISPDYEGADVVVVNTCGFIDSAKAES
LDAIGEAVVENGKVIVTGCLGVEADMIRSVHPAVLAVTGPQQYEQVVRAVHEAAPHERPH
DPYIDLVPPQGIRLTPRHYAYLKISEGCNHNCSFCIIPSMRGRLVSRPIGDVLGEARRLA
EAGVKELLVISQDTSAYGVDVKYRTGFWDGRPVKTQLTALARALGEFGVWVRMHYVYPYP
HVDELIPLMAEGRILPYLDIPFQHASPRILKAMKRPAFEDRTLARIRQWREVCPDLTLRS
TFIVGFPGETEADFQYLLDWMTEAQLDRVGCFQYSPVEGARANELADPVPDEVKAERWER
FMAHQQAISTQRLAAKIGRTLTVLVDEVDADGGATARSMADAPEIDGSVLLRDAAGRAPG
DLVQVRIEDADEYDLYGVPV
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgagccaatctccccgcgtcggtttcgtcagcctgggctgtcccaaggccctggtcgat
tccgaacgtatcctgacccaactgcgcaccgacggctacaccatcagccccgattatgag
ggggccgacgttgtcgtggtgaacacctgcggcttcatcgacagcgccaaggccgaatca
ctggacgccatcggcgaggccgtcgtggaaaacggcaaggtgatcgtcaccgggtgcctg
ggcgtggaagccgacatgatccgctccgtgcacccggcggtgctggccgtcaccggtccg
cagcagtacgagcaggtggtgcgggccgtgcacgaagccgctccgcacgaacgcccgcac
gatccgtacatcgacctggtgccgccccagggcatccgcctgacgccgcgccactacgcc
tacctgaagatctccgagggctgcaaccacaactgcagcttctgcatcattccgtccatg
cgcgggcgcctggtcagccgcccgatcggcgacgtgttgggcgaggcgcgccgcctggcg
gaggccggcgtgaaagagctgctggtgatttcccaggacaccagcgcctacggggtggac
gtcaagtaccgcaccggcttctgggacgggcgcccggtcaagacccaattgaccgcgctg
gcgcgcgccctgggcgagttcggcgtctgggtgcgcatgcactatgtctatccctacccg
cacgtcgacgagttgatccccctgatggccgaaggccgtatcctgccgtacctggacatc
cccttccagcatgccagcccgcgcatcctgaaggccatgaagcgtccagccttcgaggat
cgcaccctggcccgcatccgccaatggcgcgaggtctgtccggatctgacgctgcgctcc
actttcatcgtcggctttcctggcgagacggaagcagatttccagtatctgctcgactgg
atgaccgaggcccagctcgaccgtgtcggctgcttccagtattcgccggtcgaaggcgcg
cgcgccaacgaactggccgatcccgtgcccgacgaagtcaaggccgaacgctgggagcgc
ttcatggcgcaccagcaggcgatctcgacgcagcggttggcggcgaagatcggccgcact
ctgacggtgctggtggacgaggtcgatgcggacggcggcgccaccgcgcgatccatggcg
gatgcccccgaaatcgacggcagcgtgctgctgcgcgatgccgccggccgcgcgccgggc
gacctggtccaggtgcgcatcgaggacgcggacgaatacgatctgtacggcgtgccggtc
tag
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