Castellaniella ginsengisoli: ABRZ00_04930
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Entry
ABRZ00_04930 CDS
T10938
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
cgin Castellaniella ginsengisoli
Brite
KEGG Orthology (KO) [BR:
cgin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgin03000
]
ABRZ00_04930
Transcription factors [BR:
cgin03000
]
Prokaryotic type
Helix-turn-helix
LacI family
ABRZ00_04930
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_31
HTH_3
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
XDJ56515
UniProt:
A0AB39FZW6
LinkDB
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Position
complement(1060556..1061620)
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AA seq
354 aa
AA seq
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MNDSSSTGGGAARAPAARSRRRATGRTTLADVAALAGVSPITASRVVAGKTTVRPELVER
VRAAVEHLGYRPDPSARALASAKSSHVVVLIPLLSNTLFTELLEAVQDVMWDAGYPIFVG
ITQYRPEREAALLDSYLSHRPAGLILTGFDRSESQRRLIESSRTPCVHVMELSDDPDVHC
VGFSQVGAAQAVARHLLERGRRRIAFVGAQLDPRTLERAEGFRSVLQAAGCHDPRLEILD
SRPSSAALGAEVFRRLMAAHPDLDAVFFCNDDLAHGGLLEALRLGVPVPGRVSVVGFNDL
PGNAQMLPALSSLRTPRREVGDVAARMLLRLMRGEPVDMPAVDLGFELKVRASS
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaacgattcttcctccaccggcgggggcgccgcccgggctcccgcagcccggagccgt
cgccgggccacgggccggaccacgctggccgacgtggcggccctggccggcgtcagcccc
atcacggcatcgcgcgtggtggcgggcaagacgacggtgcgcccggagctggtcgaacgg
gtgcgcgcggcggtggagcacctcggttaccggcccgacccctcggcccgcgcgctggcc
tcggccaagagcagccacgtcgtggtgctgattcccctgctgtccaatacgctgttcacg
gaattgctggaggctgtccaggacgtgatgtgggacgccggctatccgatctttgtcggg
atcacccagtaccgccccgaacgcgaggccgcgctgctggacagctatctgtcgcaccgg
ccggcgggcctgatcctgacaggcttcgatcgcagcgagtcccagcgccgcctgatcgag
tccagccgcacgccctgcgtgcacgtgatggagctcagcgacgatccggatgtgcattgc
gtcggtttttcccaggtcggcgccgcgcaggcggtggcccgccacctgctggagcgggga
cggcggcgcatcgccttcgtcggcgcgcaactggatccgcgcacgctggagcgtgccgag
gggttccgcagcgtgttgcaggcggcgggctgccatgatccccggctggaaattcttgac
tcccggccttcgtcggccgcgctgggggccgaagtgtttcgccgtctgatggcggcgcat
cccgacctcgacgcggtgttcttctgcaacgatgacctggcccatggcggcctgctggaa
gccttgcggctgggcgttcctgtgcccggccgggtcagcgtggtgggcttcaacgacctg
ccgggcaatgcccagatgctgcccgcgctgagcagcctgcgcacgccgcgccgggaagtc
ggcgacgtggcggcccggatgctgctgcggctgatgcgcggcgagcccgtggacatgccc
gccgtggatctgggtttcgagttgaaggtccgcgccagcagttga
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