Castellaniella ginsengisoli: ABRZ00_06345
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Entry
ABRZ00_06345 CDS
T10938
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cgin Castellaniella ginsengisoli
Pathway
cgin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cgin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ABRZ00_06345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgin03400
]
ABRZ00_06345
Enzymes [BR:
cgin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABRZ00_06345
DNA repair and recombination proteins [BR:
cgin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ABRZ00_06345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
AAA_30
Zn_ribbon_PriA
AAA_22
AAA_16
Zn_ribbon_6
nSTAND_NTPase5
SRP54
Tmemb_55A
zf-CHY
Motif
Other DBs
NCBI-ProteinID:
XDJ56954
UniProt:
A0AB39CW02
LinkDB
All DBs
Position
1348195..1350312
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AA seq
705 aa
AA seq
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MASRVYLAVALDVPLPGLFDYSHDRPVPPGVRVRVMFGRRAMVGMVWAVRDAPGVAAERV
RPIEAVLDDVPPMPADWLRLAEFAAHYYHRPLGEVLLPVLPPSLRRPGAYTGARSAGGPV
CRADRRPGTSRAARKRKGGADAGAVDAAAGENAAACPAPDPARDGEGPVLTAAQACALEG
LQDLLAAGSGVALLHGVTGSGKTELYLRLARRVRAAGRQVLLLVPEINLTPQLEHSVRAR
LGDRLAVIHSRLSEGDRLRAWLRASRGQADILLGTRLALFTPLPRLGLIVVDEEHDASYK
QQDGLRYSARDLAVWRGHDLKIPVVLGSATPSLETWRHAQEGGYRLLSLPERAQAQPLPE
IRLVDTRRARLEQGFTPQLLDALEARLAQGGQSLVFINRRGYAPVLRCASCAWVSQCRRC
TAHMVLHRPGGRHVLQCHHCGDAMPVPRACPECGDPDIQPMGRGTQRVEEFLAERFPGAR
VLRIDADATRLKGSAEALFARAHAGEADILVGTQMVSKGHDFARLGLVGVLNADAMLFSQ
DFRAPERLFAQLMQVAGRAGRRQGGSEVMVQTDYPDQAVYQALLRHDYQRFAAHCLEERR
DLGLPPFSSQALLTAQADRVRDALDFLEAARARARALPETAGVRVHDPVPLRIVRVARVE
RAQLLFESDGRGALHRLLRALLPGLDELARGVVQHWGIEIDPQEI
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
gtggcgtccagggtctacttggccgtggcgctggacgtgcccttgccgggcttgttcgat
tattcccacgaccggcccgtgccgccgggggtgcgcgtgcgggtgatgttcggccgccgc
gccatggtgggcatggtatgggccgtgcgcgatgcgcccggcgtggcggcggagcgcgtc
cggccgatcgaggcggtgctcgatgatgtgccgcccatgccggccgattggctgcgcctc
gcggaattcgcggcgcactactaccaccggcccctgggcgaagtgttgctgccggtgctg
ccgccgtcgttgcgccggcccggcgcctataccggtgcgcgctcggcgggcggtccggtg
tgccgggccgaccggcggcccgggacgtcgcgcgccgcgcgcaagcgcaagggcggtgcc
gacgccggggccgtcgatgcggcggccggcgagaacgccgccgcgtgcccggcgcccgat
ccggcgcgggatggcgaggggcctgtcctgaccgctgcccaggcctgcgccctggaaggc
ttgcaagacctgctggcggccggcagcggcgtggcgttgttgcacggcgtgaccggcagc
ggcaagaccgagctctatctgcgcctggcgcggcgggtgcgggcggcggggcggcaggtg
ctgttgctggtgccggaaatcaatctgacgcctcagttggagcacagcgtgcgtgcgcgc
ctgggcgaccggctggcggtgatccacagccgcctgtccgagggcgaccgcctgcgtgcc
tggctgcgggcgtcgcgcgggcaggccgacattctgctgggcacccgcctggccctgttc
acccccctgccgcgcctgggtctgatcgtagtcgatgaagagcacgacgcgtcctacaag
cagcaggacgggctgcgctattcggcgcgcgatctggcggtctggcgcgggcacgacctg
aagatcccggtggtgctgggatcggccacgccgtccctggaaacctggcgtcacgcgcag
gagggcggctatcggctgctgtcgttgccggagcgcgcccaggctcagccgctgccggaa
atccgcctggtggatacgcgccgcgcccggctggagcaagggttcacgccccagttgctg
gatgcgctggaagcccggctggcgcaaggcgggcagagcctggtgttcatcaaccggcgc
ggttatgcgccggtgctgcgctgcgcatcctgcgcctgggtcagccagtgccggcgctgc
acggcgcacatggtgctgcatcgcccgggggggcggcacgtgctgcaatgccaccattgc
ggcgacgccatgccggtgccgcgcgcctgccccgaatgcggcgatcccgacatccagccc
atggggcgcggtacgcagcgggtcgaggagttcctggcggagcgctttcccggcgcgcgc
gtcctgcgcatcgatgccgacgccacccgcctgaaaggcagcgctgaggccttgtttgcc
cgggcgcatgccggcgaggccgatatcctggtcggcacgcagatggtgtccaaggggcat
gatttcgcgcgcctggggctggtgggcgtgctcaatgccgatgcgatgctgttttcgcag
gacttccgcgcgcccgaacggctgttcgcgcaactgatgcaggtggccggccgggccggg
cggcgccagggcggctccgaagtgatggtgcagaccgattaccccgaccaggcggtctat
caggcgttgctgcgtcacgactatcagcgctttgccgctcattgcctcgaagagcgcagg
gatctcggcctgccgccgttttccagccaggcgctgctgaccgcgcaggcggaccgggtg
cgcgatgcgctcgattttctcgaggccgcccgcgcccgggcgcgggccttgcccgagacc
gccggcgtgcgggtgcatgaccccgtgccgctgcgcatcgtgcgcgtggcccgcgtcgag
cgcgcccagctcctgttcgaatcggatggccgaggcgcgctgcaccggctgttgcgggcg
ctgctgcccgggctggacgaactggcccggggcgtcgtccagcactgggggatcgaaatc
gatccccaggagatctga
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