Castellaniella ginsengisoli: ABRZ00_06640
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Entry
ABRZ00_06640 CDS
T10938
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
cgin Castellaniella ginsengisoli
Brite
Enzymes [BR:
cgin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
ABRZ00_06640
Transfer RNA biogenesis [BR:
cgin03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ABRZ00_06640
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GFIT
Other DBs
NCBI-ProteinID:
XDJ56841
UniProt:
A0AB39DCP2
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Position
complement(1405818..1407698)
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AA seq
626 aa
AA seq
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MHVLYEDAGKLKAETIFSEADTSLQVESASGKRSKIKRNAVLFTFEQPSPDGLLPAAETL
AATLDAGFLWECAPQQEFESAALAEDYFGHAPDAVEKTAMILALSAAPAYFHRRGKGAFR
PAPPDILQAALAAIEKKRRQAELQGEWTAALLAGTLPDALRPVAATFLDRPDKNTLEWKA
FDAAVQQSGVSPERLLLSLGVWPHPLAMMRDRFFSAHFPRGTDCPPVEVLDWGGDLPQAE
VEAYSLDDASTIEIDDALSVTIPEPGTVRVGIHIAVPALAVTRGSALDEQARARMSTVYM
PGDKIPMLPRELIAAFSLDEGQWRPALSLYVTGRLEDGEVLDTETRLERIRVAANLRHGQ
IDGAVTEAALADPDAPLPHAGWLRPLWQFAQALCAVRDRTRGKPENNDRIEYGFEIDGPP
DDPDSIVRLVPRQRNAPLDRLVAEYMILANTQWGALLARHGVPGIYRSQQTGRTRMSTQA
LPHESIAVPQYIWSTSPLRRYVDLVNQGQILAAAEHGVSARLAAPFKPKDADLYALIGAF
DSQYTLWGEFQSSVERYWCIRWLQQQGLKEVGAHVLRENLVRLACAPFVTRINGLPEFER
GQEVRLDILGYDEIGLDIECRLREAS
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgcacgttctctacgaagacgccggcaagctcaaggccgaaaccattttttccgaagcc
gacacctcgctgcaggtcgagtcggccagcggcaaacgcagcaaaatcaaacgcaacgcc
gtgctgttcaccttcgagcagccttcccccgacggcttgctgcccgcggccgagaccctg
gcggccacgctggacgccggttttctgtgggagtgcgcgccgcagcaggagttcgaatcc
gccgcgctggccgaggactacttcggccatgcgcccgacgcggtggaaaagaccgccatg
atcctggccttgtcggccgccccggcctatttccaccggcgcggcaagggcgccttccgt
ccggccccgcccgacatcctgcaagccgccctggccgccatcgaaaagaaacgccgccag
gccgaactgcaaggcgaatggaccgccgccttgctggcgggcacgctgcccgacgccctg
cggcccgtcgccgccacattcctcgaccgccccgacaagaacacgctggaatggaaagcc
ttcgacgccgccgtgcagcaatcgggcgtcagccccgagcggctgctgctgtcgctgggc
gtctggccccaccccctggccatgatgcgggaccgcttcttttcggcccatttcccccgc
ggcacggactgcccgcccgtcgaagtcctcgactggggcggcgacctgccgcaggccgaa
gtcgaggcctattccctggacgacgccagcaccatcgaaatcgacgatgccctgtcggtc
acgattcccgagcccggcacggtccgggtcggcatccacatcgccgtaccggcgctggcc
gtcacgcgcggcagcgcgctggacgaacaagcgcgcgcccgcatgtccaccgtctacatg
ccgggcgacaagattcccatgctgccgcgcgaactgatcgccgccttctccctggacgaa
ggtcaatggcgtcccgccctttcgctgtacgtcaccgggcggctggaggatggcgaggtc
ctggacaccgagacccggctggaacgcatccgggtggccgccaatctgcgccacggccag
atcgacggcgcagtcaccgaggccgcgctggccgatcccgatgcccccctgccgcacgcc
ggctggctgcgccccttgtggcaattcgcccaggcgctgtgcgccgtgcgcgaccgcacg
cgcggcaaaccggaaaacaacgaccgcatcgaatatggcttcgaaatcgacggcccgccc
gacgacccggattcgatcgtccgtctggtgccgcgccagcgcaacgcgccgctggaccgg
ctggtggccgaatacatgattctggccaacacgcaatggggcgccttgctggcccgccac
ggcgtgcccggcatctaccgctcccagcagaccgggcgcacccgcatgtccacccaggcc
ctgccccacgaatccatcgccgtgccgcaatacatctggtcgacctcgccgctgcgccgc
tatgtggacctggtcaatcagggccagatcctggcggcggccgagcatggcgtctccgcc
cgcctggccgcccccttcaagcccaaggatgcagacctgtacgccttgatcggagccttc
gactcgcagtacacgctgtggggcgaattccagtcctcggtggaacgctactggtgcatc
cgctggctgcagcaacaaggactgaaagaagtcggcgcccacgtcctgagggaaaacctg
gtccggctggcgtgcgcgcctttcgtgacccgcatcaacggcctgcccgaattcgagcgc
ggccaggaagtgcggctggacatcctgggctacgacgagatcggtctggacatcgaatgc
cgcctgcgggaagcaagctag
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