Castellaniella ginsengisoli: ABRZ00_06815
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Entry
ABRZ00_06815 CDS
T10938
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
cgin Castellaniella ginsengisoli
Brite
KEGG Orthology (KO) [BR:
cgin00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cgin01011
]
ABRZ00_06815
Enzymes [BR:
cgin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
ABRZ00_06815
Peptidoglycan biosynthesis and degradation proteins [BR:
cgin01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
ABRZ00_06815
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM3_LYK4_5
LysM_RLK
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-ProteinID:
XDJ56874
UniProt:
A0AB39GZJ7
LinkDB
All DBs
Position
complement(1439460..1440860)
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AA seq
466 aa
AA seq
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MNILRLLLPLILVALAGCAANQTTEQRQAYVAEDTSRTVDLTHPPRDMWDRIRRGFAIPN
LRNERVDYWTDYYASHPQSVLLMSQRAGKYLYYIVDELNRRGMPTELALLPFVESAYNPN
ALSRSKASGLWQFIPSTGLHYKLEQNWWRDQRRDPVASTQAALDYLSYLYDFQGDWYLAL
ASYNWGEGAVKRAIGRAADAGQPTGYTALEMPEETRNYVPKLQAIKNIIARPEKFGITLP
NVSNTPYFTTVRKSRDMDIAVAAALAEMPLEDFQALNPSYNRPVILASHQATLHLPLDKV
GVFNENLKAYTGRLTSWQVVHPKKGQSLAAIAKAHGITLEQLRQANKLSAKQTRATVATL
LIPARESQAGGLMLASYSAPTADSTPQAAATGRSSTSIRIVNRPHAADLRPKPVIRTHTI
RRGDTLYSLARRYNTSVDALRKLNNLKGSSLSAGQRLRVPGADVQG
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcctgcgactccttctgccgttgatcctggtcgcattggccggctgcgccgcc
aaccagaccaccgagcagcgccaggcctatgtagcggaagacacctcgcgcaccgtcgac
ctgacccacccgccccgcgacatgtgggatcgcatccggcgcggtttcgccatccccaac
ctgcgcaacgagcgggtcgactactggacggactactacgcctcgcacccgcaatcggtg
ctgctcatgagccagcgggcgggcaaatacctgtactacatcgtcgacgagctcaatcgc
cgcggcatgcccacggaactggccctgctgcctttcgtcgaatccgcctacaaccccaac
gccctgtcgcgctccaaggcgtccggcctgtggcaattcatccccagcaccggcctgcac
tacaagctggaacaaaactggtggcgcgaccagcggcgcgatccggtcgcctccacccag
gcggcgctggattacctgagctatctgtacgatttccagggcgactggtatctggcgctg
gcctcgtacaactggggtgaaggcgccgtgaagcgcgccatcggcagggcggcggatgcc
ggccaacccactggctacaccgcgctggagatgcccgaagagacccgcaactacgtcccg
aaactccaggccatcaagaacatcatcgcccggcccgaaaaattcggcatcaccctgccc
aacgtcagcaacaccccgtatttcaccaccgtacgcaagtcgcgcgacatggatatcgcc
gtggccgccgcgctggcggaaatgccgctggaggatttccaggcgctgaacccctcgtac
aaccggcccgtcatcctggcgtcccaccaagcgaccctgcacctgcctctggacaaggtc
ggcgtcttcaacgagaacctgaaggcgtatacgggccgcctgacctcctggcaggtcgtc
cacccgaaaaaaggccagtccctggcggccatcgccaaggcgcacggcatcaccctggag
caactgcgccaggccaacaagctgagcgcgaagcagacccgcgccaccgtcgccacgctg
ctgatcccggcacgggaatcccaggccggcggcctcatgctggcttcctactcggcgccc
accgccgattcgacaccccaggccgctgcgaccggacggagcagcacttcgatccgcatc
gtcaaccggccgcacgccgccgacctgcggcccaagcccgtcatccgcacccacacgatc
cgccggggcgacaccttgtattcgctggcgcggcgctacaacacctcggtggacgccctg
cgcaaactcaacaatctgaagggctcctccttgtccgccggccagcgcctgcgcgtgccg
ggcgcggatgtacagggataa
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