Castellaniella ginsengisoli: ABRZ00_06835
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Entry
ABRZ00_06835 CDS
T10938
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cgin Castellaniella ginsengisoli
Pathway
cgin03030
DNA replication
cgin03430
Mismatch repair
cgin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cgin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABRZ00_06835 (dnaQ)
03430 Mismatch repair
ABRZ00_06835 (dnaQ)
03440 Homologous recombination
ABRZ00_06835 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgin03032
]
ABRZ00_06835 (dnaQ)
03400 DNA repair and recombination proteins [BR:
cgin03400
]
ABRZ00_06835 (dnaQ)
Enzymes [BR:
cgin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABRZ00_06835 (dnaQ)
DNA replication proteins [BR:
cgin03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABRZ00_06835 (dnaQ)
DNA repair and recombination proteins [BR:
cgin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABRZ00_06835 (dnaQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
XDJ56877
UniProt:
A0AB39F9A4
LinkDB
All DBs
Position
1443082..1443828
Genome browser
AA seq
248 aa
AA seq
DB search
MRQIVLDTETTGLEPEQGHRVVELACVEILNRRVTDRHLHLYLNPDRDSDPEALRVHGLT
TEFLSGHPRFREVARQLVDFVRDAEVIIHNAAFDVKFLNAELRRAGLPPFTELCGKVTDS
LMVAREMFPGKRNNLDALCERFGISNAHRTLHGALLDSELLGEVWLAMTRGQDSLLGEAS
DEAVDAGAGAASAHGRFDASGLPVIQVAEQASQAHEAYLDGLDKAAGRPCLWRQIDRPVE
LEAHEVAG
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcaaatcgttctggatacggaaaccacgggcctggagcccgagcagggccaccgg
gtggtggaactggcgtgcgtcgagatactcaaccggcgggtcaccgaccgccatctgcat
ctgtacctgaatcccgatcgcgacagcgatcccgaggccttgcgggtccacgggctgacg
accgaattcctgtccggccatccgcgcttccgggaggttgcccggcaactggtggatttc
gtccgcgatgccgaggtcatcatccacaatgcggccttcgacgtgaaattcctgaacgcc
gagctgcgccgcgccgggctgccgcccttcaccgagctgtgcggcaaggtcaccgattcg
ctgatggtggcgcgcgagatgttcccgggcaagcgcaacaacctggacgcactgtgcgag
cggttcggcatttccaacgcgcaccggaccttgcacggcgccttgctggactcggaattg
ctcggcgaggtttggctggcgatgacgcgcggccaggattccctgctgggcgaggcgtcc
gatgaggcggtggatgccggcgccggcgcggcgagcgcccatggccggttcgacgcctcg
ggcttgcctgtcattcaggtcgccgagcaggcttcgcaagcgcatgaagcctacctggac
ggtctggataaagcggcgggccggccttgcctgtggcggcagatcgaccgccccgtcgag
cttgaagctcacgaggtggccggctga
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