Castellaniella ginsengisoli: ABRZ00_07290
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Entry
ABRZ00_07290 CDS
T10938
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cgin Castellaniella ginsengisoli
Pathway
cgin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABRZ00_07290 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgin03019
]
ABRZ00_07290 (groL)
03110 Chaperones and folding catalysts [BR:
cgin03110
]
ABRZ00_07290 (groL)
03029 Mitochondrial biogenesis [BR:
cgin03029
]
ABRZ00_07290 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgin04147
]
ABRZ00_07290 (groL)
Enzymes [BR:
cgin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ABRZ00_07290 (groL)
Messenger RNA biogenesis [BR:
cgin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ABRZ00_07290 (groL)
Chaperones and folding catalysts [BR:
cgin03110
]
Heat shock proteins
HSP60 / Chaperonin
ABRZ00_07290 (groL)
Mitochondrial biogenesis [BR:
cgin03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ABRZ00_07290 (groL)
Exosome [BR:
cgin04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ABRZ00_07290 (groL)
Exosomal proteins of other body fluids (saliva and urine)
ABRZ00_07290 (groL)
Exosomal proteins of breast cancer cells
ABRZ00_07290 (groL)
Exosomal proteins of colorectal cancer cells
ABRZ00_07290 (groL)
Exosomal proteins of bladder cancer cells
ABRZ00_07290 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
XDJ54401
UniProt:
A0AB39EFW8
LinkDB
All DBs
Position
complement(1532991..1534637)
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKQVYFGDDARTRIVRGVNILANAVKTTMGPKGRNVVLDRSFGAPTVTKDGVSVAKEI
ELKDKFENIGAQLVKEVASKTSDNAGDGTTTATVLAQSIVEEGLKYVAAGISPMDLKRGI
DKAVTAAVDSLHSLSKPCTTSKAIAQVGSISANSDTSVGEIIANAMDKVGKEGVITVEDG
KSLDNELDVVEGMQFDRGYLSPYFINNPDKQVAVLDDPYILIFDKKISNIRDLLPVLEQV
AKSSRPLLIVAEDVEGEALATLVVNNIRGILKTTAVKAPGFGDRRKAMLEDIAILTGGTV
ISEETGLSLEKATLELLGQAKRIEVAKENTTIIDGAGQAANIEARVKQIRAQIEEATSDY
DREKLQERVAKLAGGVAVIRVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALI
RAKAAVAKVKGDNADQDAGIKLVLRAIEAPLRTIVSNAGDEASVIVNAVEQGEGNYGYNA
ATGEYGDLVEQGVIDPTKVTRTALQNAASVASLLLTTEAAVAEIVEDKPAAPMPDMGGMG
GMGGMGGF
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaagcaagtttatttcggtgacgatgcccgtacccgcatcgtccgtggcgtc
aacatcctcgccaacgccgtcaagaccaccatgggccccaagggccgcaacgtggtgctg
gaccgctccttcggcgctcccaccgtcaccaaggacggcgtctccgtcgccaaggaaatc
gaactgaaggacaagttcgagaacatcggcgcccaactggtcaaggaagtggcttccaag
acttccgacaacgccggtgacggcaccaccaccgccaccgtgctggcccagtccatcgtc
gaagaaggcctgaagtacgtggccgccggcatcagccccatggacctgaagcgcggcatc
gacaaggccgtgaccgccgccgtcgacagcctgcactccctgtccaagccctgcaccacc
agcaaggccatcgcccaggtcggctccatctcggccaacagcgatacctccgtcggtgaa
atcatcgccaacgcgatggacaaggtcggcaaggaaggtgtcatcaccgtcgaagacggc
aagtcgctggacaacgagctggacgtcgtcgaaggcatgcaattcgaccgcggctacctg
tcgccctacttcatcaacaaccccgacaagcaagtcgccgtcctggatgatccgtacatc
ctgatcttcgacaagaagatcagcaacatccgcgacctgctgccggtgctggagcaagtc
gccaagtccagccgcccgctgctgatcgtggccgaggacgtcgagggcgaagccctggcc
accctggtcgtgaacaacatccgcggcatcctgaagaccaccgccgtcaaggccccgggc
ttcggcgaccgccgcaaggccatgctggaagacatcgccatcctgacgggcggcacggtg
atttccgaagaaaccggcctgtcgctcgaaaaggcgaccctcgagctgctgggccaggcc
aagcgcatcgaagtggccaaggaaaacaccaccatcatcgacggcgccggccaggccgcc
aacatcgaagcgcgcgtcaagcagatccgcgcccagatcgaggaagccacgtccgactac
gaccgtgaaaagctgcaagagcgcgtcgccaagctggcgggcggtgtcgcggtcatccgc
gtcggcgcggccaccgaagtcgaaatgaaggaaaagaaggcccgcgtcgaagacgctctg
cacgccacgcgtgcggccgtcgaggaaggcatcgtcccgggcggcggcgtcgcgctgatc
cgcgccaaggccgccgtggccaaggtcaagggcgacaacgccgaccaggacgccggcatc
aagctggtcctgcgcgccatcgaagccccgctgcgcaccatcgtcagcaatgcgggcgat
gaagccagcgtgatcgtcaacgccgtcgagcaaggcgaaggcaactacggctacaacgcc
gccaccggcgagtacggcgatctggtcgagcaaggcgtgatcgacccgaccaaggtcacc
cgcaccgcgctgcagaacgccgcctcggtcgccagcctgctgctgaccaccgaagccgcc
gtggccgaaatcgtcgaagacaagcccgccgcgccgatgcccgacatgggcggcatgggc
ggcatgggcggcatgggcggcttctaa
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