Castellaniella ginsengisoli: ABRZ00_07400
Help
Entry
ABRZ00_07400 CDS
T10938
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
cgin Castellaniella ginsengisoli
Pathway
cgin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABRZ00_07400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgin03019
]
ABRZ00_07400
Messenger RNA biogenesis [BR:
cgin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ABRZ00_07400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-ProteinID:
XDJ54422
UniProt:
A0AB39GQX5
LinkDB
All DBs
Position
1554393..1554986
Genome browser
AA seq
197 aa
AA seq
DB search
MLDREGYRPNVGIILVNQKNEVFWGKRIREHAWQFPQGGIKHGETPVQAMYRELHEETGL
RAEHVRILGRTRDWLRYTVPDHYVRRELRGHYKGQKQIWFLLRMVGRDSDVSLRASDTPE
FDAWRWNAYWVPLDAVIEFKREVYSLALNELSGLLFRRGRENRYLRHRSPRGAGSHDDSA
GRSAESSLPKSPRPDPV
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgttggatcgcgaaggctaccgtccgaatgtcggcatcattctcgtgaaccagaaaaac
gaggttttctggggcaagcgcatcagggaacacgcatggcagtttccccaggggggcatc
aagcacggcgaaactcccgtgcaggcgatgtaccgcgaactccacgaggagaccggcttg
cgcgccgagcacgtacgcattctgggacggacccgggactggttgcgttataccgtaccg
gatcattacgtgcgccgcgaattgcggggccactataaaggccagaagcagatctggttc
ctgctgcgcatggtgggccgcgacagcgacgtcagcctgcgcgcctccgatacgcccgag
ttcgacgcctggcgctggaacgcctattgggtgccgctggatgccgtcatcgagttcaag
cgcgaggtctattctctggcgctcaacgagttgtcgggcctgctgtttcgtcgcggccgc
gagaaccgctacctgcgccatcgcagcccccgaggcgccgggtcgcacgatgattccgcc
ggccgttcggcggaatcgtcgcttccgaaatcccctcggcccgacccggtatga
DBGET
integrated database retrieval system