Castellaniella ginsengisoli: ABRZ00_07575
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Entry
ABRZ00_07575 CDS
T10938
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
cgin Castellaniella ginsengisoli
Pathway
cgin00470
D-Amino acid metabolism
cgin00550
Peptidoglycan biosynthesis
cgin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cgin00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ABRZ00_07575 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ABRZ00_07575 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cgin01011
]
ABRZ00_07575 (murD)
Enzymes [BR:
cgin01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
ABRZ00_07575 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
cgin01011
]
Precursor biosynthesis
Amino acid ligase
ABRZ00_07575 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
XDJ54446
UniProt:
A0AB39CPF7
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Position
1588601..1590139
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AA seq
512 aa
AA seq
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MTDACDFPSLRRDGLTLILGLGETGVAAARWCAARGARLRVLDTRAQPGGLEALRADGIA
ADLRLGPDALVAEALDGVHTLVLSPGLNPREAPVAGLLAAARERGIEVLGEIELFARALA
DLRAQGYTPTLLAVTGTNGKTTVTSLVRHLIETSGRRVRAAGNIGPAALASLQDALERDE
LPEAWVLELSSFQLEATRTLAPDAAVVLNVTQDHLDWHGSMQAYAAAKARLLEMARIAVV
NRDDPLVRDMVGDLAGERVRGFGMEAPSLAGDLGLLMQQGLAWLAAAPEAEADPAARIPA
RRRRAATEAPPARRPAASAQALMPAEALRIRGTHNALNALAALALCRAAGLDWAPLLHAL
RSYQGEAHRTEFVRTIAGVDFIDDSKGTNVGATLAALKGLGRPVVLIAGGLGKGQDFSPL
APAVRAHARAVLLIGQDGPLIGEALRDCEVPLQPCGTLEEAVARGMALAQPGDAVLLSPA
CASMDMFRNYAHRSACFVEAVRELAIERGEVA
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgcgtgcgatttcccctccctgcgccgcgacggcctgaccctgatcctggga
ttgggggaaacgggcgtggcggcggcgcgctggtgcgccgcgcgcggcgcccgcttgcgg
gtgttggacacgcgtgcgcagcccggcggcctggaagccctgcgggccgatggtatcgcc
gccgacctgcgcctggggccggacgccctggtggcggaggcgctcgacggcgtccatacg
ctggtgctcagcccgggcctgaatccccgcgaggcgcccgtggccggcctgctggcggcg
gcgcgcgaacggggcatcgaagttctgggcgagatcgagctgtttgcccgtgctctggcc
gatctgcgggcgcaaggctacacgccgacgctgctggcggtgacgggcaccaacggcaag
accacggtcacgtcgctggtgcgccacctgatcgaaacgagcggacgccgcgtgcgcgcc
gcgggcaatatcggcccggcggcgctggccagtctgcaggatgcgctggagcgcgacgaa
ctgcccgaagcctgggtgctggagctgtccagtttccagttggaagccacccgtaccctg
gcgccggatgccgccgtggtgcttaatgtcacgcaggaccacctggactggcacggctcg
atgcaagcctatgccgcggcgaaggcgcgtctgctggagatggcgcgcatcgccgtcgtc
aatcgcgacgatccgctggtgcgggacatggtcggcgacctggccggcgagcgggtgcgc
ggattcggcatggaagccccatcgctggcgggagacctcggtttgctgatgcagcagggc
ctggcctggctcgccgccgcgcccgaggccgaagccgacccggccgccaggatcccggcg
cgtcgccgccgcgcggcgaccgaagcgcctcccgcccggcggcccgccgcatctgcccag
gcgttgatgccggccgaggcgttgcggatccggggcacccacaatgcgctcaatgcgttg
gcggcgctggccctgtgccgcgccgccggtctggactgggcgccgctgctgcatgccttg
cgcagttatcagggcgaagcgcatcgcacggaattcgtgcggacgatcgccggcgtggat
ttcatcgatgacagcaagggcaccaatgtgggcgccacgctggcggctctgaaagggttg
ggccgtcccgtggtgctgatcgccggcggcctaggcaagggtcaggatttctcccccctg
gcgccggccgtgcgggcccacgcgcgcgcggtgttgctgattggccaggacgggccgctg
atcggtgaggcgctgagggattgcgaggtgccgctgcagccctgcggcacgctggaagag
gccgtggcccggggcatggcgctggcgcagccgggcgacgccgtgctgctgtcaccggcc
tgcgccagcatggatatgttccgcaactacgcccatcgcagcgcctgcttcgtggaagcc
gtgcgcgagctggcgattgagcgcggggaggtggcatga
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