Castellaniella ginsengisoli: ABRZ00_08100
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Entry
ABRZ00_08100 CDS
T10938
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
cgin Castellaniella ginsengisoli
Pathway
cgin02024
Quorum sensing
cgin03060
Protein export
cgin03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cgin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
ABRZ00_08100 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
ABRZ00_08100 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABRZ00_08100 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cgin02044
]
ABRZ00_08100 (ffh)
Enzymes [BR:
cgin01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
ABRZ00_08100 (ffh)
Secretion system [BR:
cgin02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
ABRZ00_08100 (ffh)
Eukaryotic Sec-SRP protein
ABRZ00_08100 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
Zeta_toxin
AAA_25
CbiA
AAA_24
AAA_18
APS_kinase
TsaE
FRP
AAA_19
AAA_33
Motif
Other DBs
NCBI-ProteinID:
XDJ54538
UniProt:
A0AB39DCQ2
LinkDB
All DBs
Position
1706991..1708406
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AA seq
471 aa
AA seq
DB search
MLDNLTSRLSRIVKTMRGEARLTEANTQEMLREVRLALLEADVALPVVRDFVARVKESAL
GQEVAGSLNPGQALVGVVHKELTALMGGDLGAEAGELSLAAQPPAVILMAGLQGAGKTTT
TGKLAKWLSEGSHVQHGRKTGRKKVLVVSADVYRPAAIDQLKTVAAQVEVDFLPTEPTQK
PQDIARHALDHAKRHHYDVLIVDTAGRLGIDQAMMDEIRALHELLSPIETLFVVDAMQGQ
DAVNVARAFSEALPLTGVVMTKLDGDARGGAALSVRQITGKPLKFVGVSEKLDGLEPFHP
ERMAQRILGMGDIVSLVEQAQKNIDVAEAQKLAARMKSGERFDLNDFRDQLQQVKKLGDM
GSLLEKLPAQFAQAASQVQGGQAEKQLARTEGILNSMTPLERAKPELIKASRKRRIATGS
GVPVQEVNRLLKQFEQMQGMMKQMKKGGMAKMMRAMGGMKGLGGFGRGGFR
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgctcgataacctgacttcccgcctgtcgcgcatcgtcaagaccatgcgcggcgaggcc
cgcctgaccgaggccaacacccaggagatgctgcgcgaggtgcgtttggcgctgctggag
gccgatgtggcgctgccggtggtgcgcgatttcgtggcgcgggtcaaggaatccgccttg
gggcaagaggtcgccggcagcctgaaccctggccaggcgctggtcggggtggtgcacaaa
gagctgaccgccttgatgggcggcgacctgggcgccgaggcgggtgagctgtccctggcg
gcgcagcccccggcggtgatcctgatggccggcctgcagggcgcgggcaagaccaccacc
accggcaagttggccaaatggctgtccgagggcagccacgtccagcatggccgcaagacc
ggccgtaaaaaggtgctggtggtcagcgccgacgtctaccgcccggcggccatcgatcag
ttgaagaccgtggctgcgcaggtggaggtggatttcctgccgaccgaacccacgcaaaag
ccgcaggatatcgcccgccatgcgctggaccacgccaagcgccatcactacgacgtgctg
atcgtcgatacggccggccgcctgggcatcgaccaggccatgatggacgagatccgcgcc
ctgcacgaactgctctcgcccatcgagacgctgttcgtggtggacgccatgcagggccag
gacgcggtcaatgtggcgcgcgcgttttccgaggcattgccgcttaccggcgtggtgatg
accaagctggacggcgatgcgcgcggcggcgcggcgctgtcggtgcgccagatcaccggc
aagccgctgaagttcgtcggcgtgtccgaaaagctcgacggcctggagcccttccacccc
gaacgcatggcccagcgcatcctgggcatgggcgacatcgtgtcgctcgtcgagcaggcg
cagaagaacatcgacgtcgccgaggcgcaaaaacttgcggcgcgcatgaagtccggcgaa
cgctttgatctcaacgatttccgcgaccaactgcagcaagtgaagaagctgggcgacatg
ggctcgctgctggaaaagctgccggcccagttcgcccaggcggcctcgcaggtgcagggc
ggtcaggcggaaaagcaattggcccgcacggaaggcatcctgaattccatgacgccgctg
gaacgcgccaagcccgagctcatcaaggcttcgcgcaagcgccgcatcgccacggggtcg
ggcgttccggtgcaagaggtcaaccgcctgctcaagcagttcgagcagatgcagggcatg
atgaagcagatgaaaaaaggcggcatggcgaagatgatgcgcgccatgggcgggatgaag
ggtttgggcggattcggccggggtggtttccgctga
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