Castellaniella ginsengisoli: ABRZ00_08505
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Entry
ABRZ00_08505 CDS
T10938
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
cgin Castellaniella ginsengisoli
Pathway
cgin00550
Peptidoglycan biosynthesis
cgin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cgin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ABRZ00_08505 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgin01002
]
ABRZ00_08505 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cgin01011
]
ABRZ00_08505 (dacB)
Enzymes [BR:
cgin01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
ABRZ00_08505 (dacB)
Peptidases and inhibitors [BR:
cgin01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
ABRZ00_08505 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
cgin01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
ABRZ00_08505 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
XDJ54610
UniProt:
A0AB39GBC0
LinkDB
All DBs
Position
1786651..1788105
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AA seq
484 aa
AA seq
DB search
MRLAGWFGRRTWRERLGAGLAACLLAGAAPGAGAQSLPPELQQAWKATRLPLSALSLEIR
EAGGPVIARVQADAPRNPASVMKTVTTWAALSALGPDYVWRTRLLSDPGARVDEQGTLQG
PLYIQAAGDPWFRQEDLWSLLRELRLRGVKNLSEVIVDRSRFGDVAIDPGDFDDSPDRPY
NASPDAMMVNFGATRVVFLPDARSRQWIPLLDPPTRDVRIEGQLGWLEGSCKASPGVAVD
VRPSGSGSVVHVSGKAFGDCGEFSVYRLAGRQEDHFEALFRLLWRELGGTLSRGIRAGRT
PARASVLVWHDSPTLADVIRQVNKHSNNVMARMTLLTLGAEINGPGATAQSGGRAVRQIL
QNQGVDTTGWVLDNGSGLSRQGRVTAHGLAQMLDVAWRSPMMPEFVSSLAISGVDGTVRR
RLRAEDTRGQAHLKTGTLRDSRALAGYVRGASGKRYILVSLVNDPGAAAVRPFDDAVVEW
LAAR
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggcgggatggtttggacggcggacatggcgagagcgcctgggcgcagggctg
gcggcgtgcctgctggcgggtgcggccccgggcgccggcgcgcagagcctgccgcctgag
ctgcagcaggcctggaaggccacccgcttgccgctgtcggccctgtcgcttgaaatccgc
gaggccggcggcccggtgatcgcccgcgtccaggccgatgcgccgcgcaacccggcttcg
gtgatgaagaccgtgaccacctgggccgcgctgtcggcgctggggccggattacgtctgg
cgcacccggctcttgtctgatccgggcgcgcgcgtcgacgagcagggcaccttgcagggg
ccgctctatattcaggcggccggcgacccctggttccgccaggaagacctctggagcctg
ctgcgcgaattgcgcctgcgcggggtcaagaacttgtccgaggtcatcgtggaccgcagc
cgctttggcgacgtggccatcgatccgggcgatttcgacgattccccggaccggccctac
aacgccagccccgacgcgatgatggtcaatttcggcgcgacccgggtggtgttcctgccc
gatgcccgatcgcggcagtggattcctttgctcgatccgccgacgcgcgatgtgcgcatc
gaaggccagctcggatggctggagggatcctgcaaggcttcgcccggagtggcggtcgac
gtgcgtccctcgggatccggctccgtcgtccacgtctccggcaaggcattcggcgattgc
ggcgaattcagcgtgtatcgcctggccggccggcaggaagatcatttcgaggccttgttc
cgcctattgtggcgtgagctgggcggcacgctgtcgcgcggcatccgcgcgggccgtacg
cccgcccgcgcttcggtgctggtctggcacgattcgccgacgctggccgacgtgatccgc
caggtcaacaagcacagcaacaacgtcatggcgcgcatgaccttgctgaccctgggcgcg
gagatcaacgggcctggcgcgaccgcgcagagcggcggccgcgcggtccggcagatcctg
cagaaccagggggtggacaccacgggctgggtgctggacaacggctccgggctgtcgcgc
cagggccgcgtcacggcgcatggcctggcgcagatgcttgacgtggcctggcgttcgccc
atgatgcccgagttcgtgtcctcgctggcgatttccggggtggacggcaccgtgcgccgc
cgcctgcgggccgaggacacgcgcggccaggcgcatctgaagaccggcaccttgcgggat
tcgcgcgcgctggccggctacgtgcgcggcgccagcggcaagcgctacatcctggtcagc
ctggtcaatgatccgggcgcggccgccgtgcggccattcgacgatgccgtcgtcgaatgg
ctggcggcgcgctga
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