Castellaniella ginsengisoli: ABRZ00_08815
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Entry
ABRZ00_08815 CDS
T10938
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
cgin Castellaniella ginsengisoli
Brite
KEGG Orthology (KO) [BR:
cgin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgin03036
]
ABRZ00_08815 (xerD)
Chromosome and associated proteins [BR:
cgin03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
ABRZ00_08815 (xerD)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_M
Motif
Other DBs
NCBI-ProteinID:
XDJ54667
UniProt:
A0AB39F1W9
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All DBs
Position
complement(1853453..1854355)
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AA seq
300 aa
AA seq
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MAQPSLFPTIDAFLDALWLEDGLADNTLAAYRRDLCAFGGWLRAERGRPPETARQEDIQA
WLAAQYRQTKASTANRRLAALRRFFLWALRRGLCVEDPCLGLRSARQPARFPKTLSETQV
EALLAAPDIDTPLGLRDRAMLETLYATGLRVSELVGLAVQELSLSDGVVRVVMGKGGKDR
LVPLGAEALHWIERHLRESRPAILGARPCDVLFVTARGAGMTRQAFWQLIRKYAQQADIR
VPLSPHVLRHAFATHLLNHGADLRVVQMLLGHADISTTQIYTHVARERLKTLHAQHHPRA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagccctctcttttcccgacgatcgacgcttttctggacgccctgtggctggag
gacggcctggcggacaataccctggccgcctaccggcgcgacctgtgcgccttcggcggc
tggctgcgcgccgaacgcggccgtccgcccgagacggcgcggcaagaggacatccaggcc
tggctggcggcacagtaccggcagaccaaggccagcacggccaaccggcgcctggccgcc
ctgcggcggttctttctatgggcgctgcggcgcggcctgtgcgtcgaagacccctgtctg
ggcctgcgcagcgcccgccagcccgcccggtttcccaagaccttgtccgagacccaggtc
gaagccctgctggccgcgccggacatcgacactcctctggggctgcgcgaccgcgccatg
ctggaaaccctgtatgccacgggcctgcgtgtcagcgaactggtcgggctggccgtccag
gaactgagcctgagcgacggcgtcgtgcgcgtcgtcatgggcaaaggcggcaaggatcgc
ctggtgcccctgggcgccgaagccctgcactggatcgagcgccatctgcgtgaaagccgg
ccggccatcctcggggcgcgtccctgcgatgtcttgttcgtcaccgcccgcggggccggc
atgacgcgccaggccttctggcagttgatccgcaagtacgcccagcaggccgacatccgc
gtgcccctgtcgccccacgtgctgcgccatgccttcgccacccacttgctgaaccacggc
gccgacctgcgcgtcgtgcagatgctgctgggccacgcggatatctccaccacccagatc
tacactcacgtcgcccgggaacggctcaagaccctgcacgcccagcaccatccgcgcgcc
tga
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