Castellaniella ginsengisoli: ABRZ00_08915
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Entry
ABRZ00_08915 CDS
T10938
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
cgin Castellaniella ginsengisoli
Pathway
cgin03420
Nucleotide excision repair
Brite
DNA repair and recombination proteins [BR:
cgin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABRZ00_08915 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ABRZ00_08915 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XDJ54686
UniProt:
A0AB39CML8
LinkDB
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Position
complement(1870191..1875824)
Genome browser
AA seq
1877 aa
AA seq
DB search
MNAPIRIFGARQNNLKNLDLTIRTGELLVVTGVSGSGKSSLAFDTLYAEGQRRYVETFSP
YARQFLDRMDKPQVDRIEGILPAIAIDQVNPVRNSRSTVGTMTELNDHLKLLYARAGHLH
CRRCARPVTRDDPASIRHQLDSLCAARDPRLVVTFPVSVPANFTEDEVRGFLEQQGYTRI
HRQDEPAPAPEAAGKAGGRRKAADAVRRVLHVVQDRFRLGNAESARVDEALETALRQGNG
RLAVHALFDEGEETWRFSAGLHCARCDIDYGTALPSTFSFNSPLGACEHCRGFGRVMGID
YGLVVPDETRSLRNGAIKPWQTASYQECQVEMERYAPKAGVRLDVPWRDLTDEERAWVIG
GTPDWKGGPSAWKHQWYGAQRFFDWLESRAYKMHVRVLLSKYRSYTPCPHCKGARLKPDA
TLWRLGQDHDPIPGPARFLPAHAHWTPEQLAALPGLGLHDLMRLPIERVRDWFDRIELGR
TLDEALTELLDEVRARLRFLCDVGLGYLSLDRQSRTLSGGEVQRINLTTALGTSLVNTLF
VLDEPSIGLHPRDIHRIVQVMHRLRNHGNTLVVVEHDPQVMIAADRVLDIGPGPGERGGH
IVFDGTPAELAVADTLTGRYFGGRLRIEAPRPLPVKDGTPRLLLQGVRANNLQGIDLSLP
LGRLVCLTGVSGSGKSTLVQDVLYPALLKRLGRATEAPGEYTTLLGAERIADVVMVDQTP
IGKTARSNPASYVGAFDAIRKLFAAAALSQERGYTAGTFSFNTGDGRCPGCGGTGFEHVE
MQFLSDVYLRCPDCDGRRFRPQVLEVRIEHLGRSASIDEVLDMTVSEALDFFKGLRDVQW
GLAPLADVGLEYVRLGQPVPTLSGGEAQRLKLAGHLAAAARSRAPQGALKGSLLLFDEPT
TGLHFDDIARLMQAFRKLLAAGHSLLIIEHNLDVIRAADWVVDLGPEGGDQGGRIVAEGT
PEDLMRHPGSHTGRALADYARQESSPALVLREPAPHPPAASASPDIHILNAREHNLKGID
VHIPRDAFTVITGVSGSGKSTLAFDILFNEGQRRYLESLNAYARAIVQPAGKPDVDAIYG
IPPTVAIEQRTSRGGRKSTVATMTEIHHFLRLLYVRLGTQMCPDCNVPVAPQTPEQIVAQ
LLHDHTGEHIGLLAPLVVARKGYYTDLAKWAASHGHTHLRVDGAFIPVNPWPRLDRYQEH
TIELPVSDLIVDVRDEAGLREAVRAALALGHGSFRVLAGLTAPGPATLEARRAAGLAPDP
RLLTFSIKRACPSCGTSFPEPDPRLFSYNSRHGWCPGCYGTGLQLTGFTEDQTGEESVWL
DETTGFPQPCTQCQGQRLNRVARAFRWRDRSIAELASMPVSDAQRFFLGLGAQGREAEIA
RDILVEIRGRLNFMMDVGLGYLALDRAAPTLSGGEAQRIRLAAQLGSNLQGVCYVLDEPT
IGLHPRDNRILLDALTRLEGNGNTLVVVEHDEDTIRRAGHVIDIGPGAGVRGGMVVAQGT
VEEITRNPASVTGRYLREPLVHPMNGRRAVNAATPSLDIEDATLHNLRQTHARLPLGRLN
VITGVSGSGKSTLARDVLLDNLSQRVGKRLSGPWRGCRTIHGWEAVDRVLEVDQTPIGKT
PRSCPATYVGFWDDIRKLYASTRESRLRGWTGSRFSFNTGDGRCPECEGQGMRTIEMSFL
PDVKVLCDACHGARFNQETLSVQWNGRSAGDVLRMEVDDAIGHFSAHRRIARALQLMQDV
GLGYLTLGQPSPTLSGGEAQRIKLVTELTKAHLDEGVLRTGRASRAPHTLYVLDEPTVGL
STADVEKLIRVLHRLVDAGHTVVVIEHNLDIIAEADWIVDLGPEGGDQGGRVVAQGSPEQ
LCASDTHTGRILAEFMK
NT seq
5634 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcacccatccgcatcttcggcgcccgccagaacaacctgaaaaacctggatctg
acgatccgcaccggggagctcctggtggtgaccggcgtgtccgggtccggaaagagctcg
ctggccttcgacacgctctacgccgagggccagcggcgctacgtcgaaaccttctcgccc
tacgcccgccagttcctggaccgcatggacaagccccaggtcgatcgcatcgaaggcatc
ctgccggccatcgccatcgaccaggtcaatccggtgcgcaattcgcgcagcaccgtaggc
accatgacggagctgaacgaccacctgaagctgctctacgcacgcgccggccacctgcac
tgccgccgctgcgcccggcccgtcacccgcgacgatcccgccagcatccggcaccagttg
gacagtctgtgcgccgcccgcgatccccggctggtcgtcacattcccggtttcggtgccc
gccaacttcaccgaagacgaggtgcgcggcttcctggaacagcaaggctacacgcgcatc
catcgccaggacgagcccgcgcccgcgcccgaagccgccggcaaggcgggcgggcggcgc
aaggcggccgacgccgtccggcgcgtgctgcacgtcgtgcaggatcggtttcgcctgggc
aatgcggaatccgcccgcgtggacgaagccctggaaaccgccctgcgccagggcaatggc
cggctcgccgtccacgcgctgttcgacgaaggcgaagaaacctggcgcttcagcgccggc
ctgcactgcgcgcggtgcgacatcgactacggcaccgcgctgcccagcactttttccttc
aactcccctctgggcgcctgcgaacattgccggggctttggccgggtcatgggcatcgac
tacggcctggtggtgccggacgaaacccgcagcctgcgcaatggcgcgatcaaaccctgg
cagaccgccagctaccaggagtgccaggtcgagatggaacgctacgcccccaaggcgggc
gtgcgcctcgacgtgccctggcgcgacctgaccgacgaagagcgcgcctgggtgatcggc
gggacgccagactggaaaggcggtccttccgcctggaagcaccagtggtacggcgcgcaa
cgcttcttcgactggctggaatcccgagcctacaagatgcatgtgcgtgtgctgttgtcg
aaataccgcagctacacgccctgcccgcactgcaaaggcgcgcgcctcaagccggacgcc
accttgtggcgcctgggccaggatcacgatccgattcccggcccggcccgtttcctgcct
gcgcacgcgcactggacgcccgagcagttggcggccctgcccggcctggggctgcatgac
ctgatgcgcctgcccatcgagcgggtgcgggactggttcgaccgcatcgagctcggccgc
acgctggacgaagcgctgaccgaactgctggatgaagtccgcgcccgcctgcgcttcctg
tgcgacgtcggcctgggctacctgtcgctggaccggcagagccgcaccctgtcgggcggc
gaggtccagcgcatcaacctgaccacggcgctgggcacgtccctggtgaacacgctgttc
gtgctggacgagccatccatcggcctgcacccgcgagacatccaccgcatcgtccaggtc
atgcaccgcctgcgcaaccacggcaataccctggtggtggtcgagcatgatccccaggtc
atgatcgccgccgaccgcgtcctggacatcggcccgggccccggagaacgcggcggccac
atcgtcttcgacggtacgccggccgagctggccgtggccgacacgctgacgggccgctat
ttcggcggccgcctgcgcatcgaggcgccgcgtcccctgccggtgaaggacggtacgccg
cgcctgctgctgcaaggcgtccgcgccaacaacctgcagggcatcgacctgtcgctgccg
ctgggccggctggtgtgcctgaccggcgtctcgggatcgggcaaatccaccctggtgcag
gacgtactctatcccgccttgctcaagcggctgggccgcgccacggaagcgccgggcgag
tacacgaccctgctgggcgcggaacgcatcgccgatgtggtgatggtggaccagacgccc
atcggcaagacggcgcgttccaacccggccagctacgtcggcgccttcgacgccatccgc
aagctgttcgcggccgccgcgctgtcgcaggaacgcggctacacggccggcacgttcagc
ttcaacaccggcgacggccgctgccccggctgcggcggcaccggcttcgagcatgtggaa
atgcaattcctgtcggacgtgtacctgcgctgcccggattgcgacggccgacgcttccgg
ccccaggtgctggaagtgcgcatcgagcacctgggccgcagcgcctcgatcgacgaagtc
ctggacatgaccgtgagcgaggcgctggatttcttcaaggggctgcgcgacgtgcaatgg
ggcctggcgcccctggccgacgtgggcctggaatacgtccgcctgggccagccggtgccc
accttgtcgggcggcgaggcgcaacgcctgaagctggccggccacctggccgcggccgcg
cgctcgcgcgccccccagggggcgctcaagggcagcctgctgctgttcgacgagcccacc
accggcctgcacttcgacgacatcgcccgtctgatgcaggctttccgcaagctgctggcc
gcgggccattcgctgctcatcatcgagcacaacctggatgtgatccgcgccgccgactgg
gtcgtggatctggggcctgagggcggggaccagggcggccgcatcgtggccgaaggcacg
cccgaagacctgatgcgccatcccggctcccataccggccgggcgctggccgactacgcg
cgccaggagagcagcccggccctggtcttgcgcgagcccgcgccgcacccgccggccgcc
tcggccagccccgacatccatatcctgaacgcccgagaacacaatctgaaaggcatcgac
gtgcacatcccgcgcgacgccttcaccgtcatcaccggcgtatcgggttcgggaaaatcc
accctggccttcgacattctcttcaatgaaggccagcggcgctacctggaatccctgaac
gcctacgcgcgcgccatcgtgcagccggccgggaagccggacgtggatgcgatctacggc
atcccgcccaccgtcgcgatcgagcagcgcaccagccggggcgggcgcaagtccaccgtc
gccaccatgacggagatccaccatttcctgcgcctgctgtacgtgcgcctgggcacgcag
atgtgcccggactgcaacgttcccgtggcgccgcagaccccggagcagatcgtcgcgcag
ttgctgcacgaccacacgggcgaacatatcggcctgctcgccccgctggtggtggcgcgc
aagggctactacaccgacctggcgaaatgggcggcttcgcatggccatacccacctgcgc
gtggatggcgccttcatcccggtcaacccctggccgcgcctggaccgctaccaggagcac
accatcgagctgcctgtgagcgacttgatcgtggacgtgcgcgatgaagccggcctgcgc
gaagccgtgcgggccgctctggcgctgggccacggcagcttccgcgtgctggccggcctg
accgcccccggtccggccacgctcgaggcccgccgtgccgccggcctggcgcccgacccg
cgcctgctgaccttctccatcaaacgcgcctgcccgagttgcggcaccagcttcccggaa
cccgatccgcgcctgttctcgtacaactcgcgccacggctggtgcccgggctgctatggc
accggcctgcaactgaccggcttcaccgaggaccagaccggcgaggaatccgtctggctg
gacgaaaccaccgggtttccgcaaccctgcacccaatgccagggccaacggctgaaccgc
gtggcgcgggcgttccgctggcgcgaccgctccatcgcggagctggcctcgatgcccgtc
agcgacgcccaacgctttttcctcggcctgggcgcccagggccgcgaggccgagatcgcg
cgcgacatcctggtcgaaatccgcggccgcctgaacttcatgatggacgtgggcctgggc
tacctggccctggaccgcgccgcgcccaccctgtcgggcggcgaggcgcagcgcatccgc
ctggccgcgcaactgggctcgaacctgcaaggcgtgtgctacgtgctcgacgagcccacc
atcggcctgcatccgcgcgacaaccgcatcctgctggatgccctgacccgcctggaaggc
aatggcaacaccctggtcgtggtcgaacacgacgaagacaccatccgccgcgccggccac
gtgatcgacatcggtccgggcgccggcgtgcgcggcggtatggtggtcgcccagggcacg
gtcgaggaaatcacccgcaacccggcgtcggtcaccggacgctacctgcgcgaacctctg
gtccaccccatgaacggccggcgcgccgtgaatgccgccacccccagcctggacatcgaa
gacgccacgctgcacaacctgcgccagacccacgcgcgccttccgctgggccgcctgaac
gtcatcaccggagtctcgggctcgggcaaatccacgctggcgcgcgacgtgctgctggac
aatctgtcccagcgggtcggcaagcgcctgagcggcccctggcggggctgccgcacaatc
cacggctgggaggccgtcgaccgggtgctggaggtcgaccagacgcccatcggcaagaca
ccccggtcctgcccggccacctacgtgggcttctgggacgacatccgcaagctctacgcc
agcacgcgcgaatcccggctgcgcggctggacgggctcgcgcttttccttcaataccggc
gacggccgctgcccggaatgcgaaggccagggcatgcgcaccatcgagatgagcttcctg
ccggacgtcaaggtgctttgcgacgcctgtcacggcgcgcgtttcaatcaggaaaccctg
agcgtgcaatggaacggccgcagcgccggagacgtgctgcgcatggaggtggatgacgcc
atcgggcatttctccgcgcaccgccgcatcgcccgcgcattacaactgatgcaggacgtg
ggcctgggctacctgacgctgggccagccctcgccgacactgtccggcggcgaggcccag
cgcatcaaactggtcacggaactcaccaaggcgcacctggacgaaggcgtgctgcgcacc
ggccgcgcatcgcgcgcgccgcataccctttacgtgctggacgagcccacggtgggcctg
tccacggcggacgtcgaaaaactgatccgcgtgctgcaccggctggtggacgccggccat
accgtggtcgtcatcgaacacaatctggacatcatcgccgaggccgattggatcgtggac
ctgggcccggagggcggcgaccagggcggccgcgtggtcgcccagggcagccccgagcaa
ctttgcgcgagcgacacgcacaccgggcggatcctggcggaattcatgaaatga
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