Castellaniella ginsengisoli: ABRZ00_09915
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Entry
ABRZ00_09915 CDS
T10938
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cgin Castellaniella ginsengisoli
Brite
KEGG Orthology (KO) [BR:
cgin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgin03016
]
ABRZ00_09915 (truB)
Enzymes [BR:
cgin01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ABRZ00_09915 (truB)
Transfer RNA biogenesis [BR:
cgin03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ABRZ00_09915 (truB)
Prokaryotic type
ABRZ00_09915 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
XDJ54873
UniProt:
A0AB39DTT7
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All DBs
Position
2094166..2094924
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AA seq
252 aa
AA seq
DB search
MASRRGQMLDGVLLLDKPEGLSSNHALQRAKRTVDARKAGHTGTLDPFATGLLICCFGRA
TKISAAMLEADKVYEATLTFGEETDSGDLTGHITARAPADFGGVDAAALEAALTAFRGEI
EQIPPMISALKRDGKPLYEYARQGIELERPPRRIVIHALDLLACEGRTARLRVHCSKGTY
VRTLAQDIGRRLGCLAHLSALRRTAVGPFPIEQAVGLEALQAMESPATALIPLHALPDGL
RPAGASTEENIL
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccgacgcgggcagatgctcgacggagtcctgttgctggacaaaccggagggc
ctgtcgagcaaccatgcgctgcagcgcgccaaacggacggtcgatgcccgcaaggcgggc
cacaccggaacgctggaccccttcgccacgggcctgctgatctgctgtttcggccgggcg
acgaaaatctccgccgccatgctggaggccgacaaggtctacgaggcgacgctgactttc
ggcgaggaaaccgacagcggcgacctcacggggcatatcacggcgcgcgcccccgcggat
ttcggcggcgtggacgctgccgcgctcgaagccgcgctgacagcgttccggggcgagatc
gagcagattccgcccatgatctcggcgctcaagcgcgacggcaagcccttgtatgagtac
gcgcgccaggggatcgagctggagcgtccgccgcgcaggatcgtgattcacgccttggac
ctgctggcttgcgagggccggaccgcccggctgagggtgcactgcagcaagggtacttat
gtgcgcaccctggcgcaggacatcggccgccgcctgggttgcctggcgcatctgtcggcc
ctgcggcgcaccgctgtcgggccgttcccgattgaacaggccgtggggctggaagccctg
caagccatggagtcgccggcgacggcgctgatccctttacacgccttgccggacggtctg
cgtccggccggtgcttccaccgaggaaaacattctatga
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