Castellaniella ginsengisoli: ABRZ00_09970
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Entry
ABRZ00_09970 CDS
T10938
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cgin Castellaniella ginsengisoli
Pathway
cgin03030
DNA replication
cgin03410
Base excision repair
cgin03420
Nucleotide excision repair
cgin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cgin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABRZ00_09970 (polA)
03410 Base excision repair
ABRZ00_09970 (polA)
03420 Nucleotide excision repair
ABRZ00_09970 (polA)
03440 Homologous recombination
ABRZ00_09970 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgin03032
]
ABRZ00_09970 (polA)
03400 DNA repair and recombination proteins [BR:
cgin03400
]
ABRZ00_09970 (polA)
Enzymes [BR:
cgin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABRZ00_09970 (polA)
DNA replication proteins [BR:
cgin03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ABRZ00_09970 (polA)
DNA repair and recombination proteins [BR:
cgin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ABRZ00_09970 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABRZ00_09970 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
XDJ54882
UniProt:
A0AB39G0M5
LinkDB
All DBs
Position
2103714..2106434
Genome browser
AA seq
906 aa
AA seq
DB search
MKKTLLLVDGSSYLYRAFHAMPDLRNARGEPTGALYGVISMLRRLLQDYKDVATHGACVF
DAPGGSFRETLYPDYKANRPSMPEELRSQIEPIHRAAAALGWTVIAAPGVEADDIIGTLA
RRAGESGFYTIISTGDKDLAQLVNDRVELINTMSGERQDREGVIRKFGVPPERVVDYLML
TGDAVDNVPGVDKVGPKTAAKWLGEYGDIETLIARAGEVRGVAGENLRAAAPNFPLTREL
LTIRLDCELEASWQPGALDLRAPDRKTLVELYEAYGFRTWLREETGEPDRIPAQDARAAR
EAPPAPDAVHYETILDEAALDGWLARLRAAPLVALDTETTSLDPMAARLVGLSFAIEPGS
AAYIPVGHRAPGTPEQLDRALVLERLKPWLEDPAAPKLLHHAKYDAHVFANEGVALRGVR
HDTMLQAYVLQSHRRVNLQDLCIQWLGLTGTTYEDLCGKGARQIGFDEVALDQAAHYAAE
DADFTLRLHRVLYPQVQAEAGLERIYALEIRTSDALMRVERNGVAIDAGVLAAQSHELGR
QMIDLESQAHALAGQPFNLNSPKQLGEILFQRMQLPVLRKTAGGAPSTDEEVLTRLAADY
PLPRLLLDYRGIAKLKSTYTDKLPRMIDPRTGRVHTRYAQAAVVTGRLASSDPNLQNIPV
RTAEGRRVRSAFVSSLGKIVSADYSQIELRVMAHVSGDENLRRAFAQGQDIHRATAAEVF
GLAPDQVDAEHRRAAKAINFGLIYGMGEFGLASNLGITRAAAKSYIDRYFMRYPGVADYM
DRIRRQAREQGYVETVFGRRLYFPELSGAKGPRAAAAERAAINAPMQGTAADLIKMAMVA
VQDWLDAEGLRSLMVMQVHDELVFDVLEDEVEVLRERVPSLMSRVAELSVPLVAEVGVGP
DWGAAH
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaccttgttgctcgtggatgggtccagctacctgtaccgcgcctttcacgcg
atgcccgatctgcgcaatgcgcggggagaacccaccggagccctgtatggcgtcatctcc
atgttacggaggctattgcaggattacaaggacgtggcaacccatggggcgtgcgtgttc
gatgcgccgggcgggtcgttccgggaaacgctctaccctgattacaaggccaatcggccg
tcgatgcccgaagagctgcgcagccagatcgagccgatccaccgcgcggctgcggcgctg
ggctggaccgtgatcgcggcgccgggcgtggaggccgacgacatcatcggcaccctggcg
cgccgggcgggcgaaagcggcttttataccatcatttcgacgggcgacaaggatctggcc
cagttggtcaatgaccgggtggaactcatcaacaccatgtcgggcgagcgccaggaccgc
gagggcgtgatccgcaagttcggtgtgccgcccgaacgcgtcgtggactatctgatgctg
accggcgacgccgtggacaatgtgccgggggtggacaaggtcggccccaagaccgccgcc
aagtggctgggcgagtatggcgacatcgagacgctgatcgcccgtgccggcgaggtgcgc
ggcgtggccggcgagaatctgcgcgcggcggcgccgaatttccccctgacccgcgaactg
ctgaccatccgtctggattgcgaactcgaggcctcctggcagccgggcgcgctggatctg
cgtgcgcccgaccgcaagacgctggtcgagctgtacgaagcctacggtttccggacctgg
ctgcgcgaggagaccggcgaaccggaccggattccggcccaggatgcgcgcgccgcgcgc
gaggcgccgcctgcgcccgacgccgtgcactacgaaaccatcctcgacgaggcggcgctg
gacggctggctggcgcggctgcgggctgcccccctggtggccctggataccgaaaccacc
agcctggatcccatggccgcccgcctggtggggctgtcgttcgccatcgaaccgggcagc
gccgcctacattcccgtgggtcaccgcgcaccgggcacgcccgagcagttggatcgcgcc
ctggtgcttgagcgcctgaagccctggctggaggatccggccgcgcccaagctgctgcac
catgccaagtacgatgcccacgtattcgccaacgagggggtcgccttgcgcggcgtgcgg
cacgacaccatgctgcaggcctatgtgctgcagtcccaccggcgggtcaatctgcaggat
ctgtgcatccagtggctggggctgacgggcacgacgtatgaggatctgtgcggcaagggc
gcgcgccagatcggtttcgacgaggtcgcgctggaccaggcggcgcattacgccgccgag
gacgccgatttcacgctgcgcctgcaccgggttctgtatcctcaggtccaggccgaggcc
ggactggaacgcatctacgcgctggaaattcgcacctcggatgcgctgatgcgcgtcgag
cgcaacggcgtggccatcgatgccggggtcctggctgcgcagagccacgaattgggccgc
cagatgatcgacctcgaatcgcaggcccatgccctggcggggcagcccttcaatctgaac
tctcccaagcaactgggtgaaatcctgttccagcgcatgcaactgccggtgctgcgcaag
acggcgggcggcgcgccatccaccgacgaggaagtcctcacccggctggcggccgactat
cctctgccgcgcctgctgctggactatcgcggcatcgccaagctgaaatccacctacacc
gacaagttgccgcgcatgatcgatccgcgcaccggcagggtgcatacgcgctacgcccag
gcggccgtggtgacggggcggctggcttcgtccgatcccaatctgcagaacatcccggtg
cgcacggccgagggccgccgcgtgcgctcggctttcgtgtccagcctgggaaagatcgta
tcggccgactattcgcagatcgaattgcgtgtgatggcgcatgtctcgggcgacgagaat
ctgcgccgggctttcgcccaggggcaggacatccaccgcgccacggccgccgaggtattc
ggcctggcgcccgatcaggtcgatgcagagcaccgccgggcggccaaggccatcaatttc
ggcctgatctacggcatgggcgaattcggcttggccagcaacctgggcatcacccgggcg
gcggccaaatcctatatcgatcgctatttcatgcgctatcccggcgtggccgactacatg
gaccgcatccgccggcaggcccgcgagcagggctatgtggaaaccgtgttcggacgccgc
ctgtacttcccggaactgtcgggcgccaaggggccgcgcgcggccgccgccgagcgggcc
gccatcaatgcgcccatgcagggcacggcggccgatctcatcaagatggccatggtggcg
gtccaggattggctggacgccgaggggttgcgcagcctgatggtcatgcaggtccatgac
gaactggtgttcgacgtgctcgaggacgaggtcgaagtcttgcgcgaacgggtgccgtcc
ctgatgagccgggtggccgagctgtccgtgcccttggtggcggaagtgggcgtgggcccc
gactggggcgccgcccactga
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