Castellaniella ginsengisoli: ABRZ00_11135
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Entry
ABRZ00_11135 CDS
T10938
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cgin Castellaniella ginsengisoli
Pathway
cgin03420
Nucleotide excision repair
cgin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ABRZ00_11135
03430 Mismatch repair
ABRZ00_11135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgin03400
]
ABRZ00_11135
Enzymes [BR:
cgin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABRZ00_11135
DNA repair and recombination proteins [BR:
cgin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABRZ00_11135
MMR (mismatch excision repair)
Other MMR factors
ABRZ00_11135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
XDJ55087
UniProt:
A0AB39FW18
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All DBs
Position
2350608..2352905
Genome browser
AA seq
765 aa
AA seq
DB search
MLEGLNPQQRDAVTLPAEHALVLAGAGSGKTRVLTTRMAWLIQTGQVGPHGLLAVTFTNK
AAREMLTRLSALLPINTRGMWVGTFHGLCNRLLRAHHREAQLPQAFQILDSADQLSAIKR
MLKAAGIDDERFPARDVQRMINGAKEDGLRPGDLDARDAHARRLADLYQRYQDQCEREGV
VDFGELLLRAYELLQREAPIREHYQRRFQQILVDEFQDTNVLQYRWLMLLAGAHTPVFAV
GDDDQSIYAFRGANVGNMADFEQRHAQGRVIRLEQNYRSHGHILDSANALIAHNTRRLGK
NLWTDAGEGEPLRVVEQASDALEAQWLVDEIRALIREGRPAREIAILYRSNAQSRPIEHA
LFSARVPYRVYGGQRFFERQEIKHVLAYLRLIDNPDDDTSWMRVVNFPTRGIGARTLEQQ
ADIAAQQNSSLAGAVAFVPGKAGAVLARFATLIRELAEAARTLDLPELIGHVVHHSGLEA
HYRADREGQDRLENLQELVNAAAAFVAEEGFQGLPAGRVPAAAAAAEAASGPDAAFDMGA
EPSPAVMSPLGAFLSHASLEAGDNQAQAGEDAVQLMTVHAAKGLEFDAVFITGLEEGLFP
HENSLLDAGGLEEERRLMYVALTRARERLTLTLAQSRMLHGQTRYGMRSRFLDEIPEEHL
KWITPRQRPAAAQPPWSGAFRRGLGGWQGEAGSSFAPRAARTQSSGVTVGDQCFRIGSGV
RHGRFGEGTVVALSGSGAEAQARIEFRDAGTKTLALGVAKLEVLD
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaaggattgaacccgcagcagcgggacgcggtcactttgccggccgagcacgcc
ctggtgctggccggcgcgggcagcggcaagacccgcgtcctgaccacgcgcatggcctgg
ctgatccagacggggcaagtcggtccccatgggctgctggccgtcacgttcaccaacaag
gccgcgcgcgagatgctgacgcggctgtcggcgctgctgcccatcaatacccggggcatg
tgggtcgggacgttccatggcttgtgcaacaggttgctgcgcgcgcatcaccgcgaggcg
cagttgccccaggccttccagatcctggacagcgccgatcagttgtcagccatcaagcgc
atgctgaaggccgccggcatcgacgacgaacgcttccccgcgcgcgatgtgcagcgcatg
atcaacggcgccaaggaagatggcctgcgcccgggcgacctggatgcgcgcgacgcccat
gctcggcggctggccgatctgtaccagcgctatcaggatcaatgcgaacgagaaggcgtg
gtcgatttcggcgaactgctgctgcgcgcctacgagctgctgcagcgcgaggcgccgatc
cgcgaacactaccagcgccggttccagcagatcctggtcgatgaattccaggataccaat
gtcctgcagtaccgctggctgatgctgctggcgggcgcgcacacgccggtgttcgcagtg
ggcgacgacgatcagtccatctatgcctttcgcggagcgaatgtcggcaacatggccgac
ttcgaacagcgccacgcccagggccgcgtcatccggctggaacagaactaccgttcgcac
ggccatatcctggattcggccaacgcgctgatcgcgcacaatacgcgccgcctgggcaag
aacctgtggaccgacgcgggcgagggcgaacccctgcgcgtggtcgagcaggcgtccgac
gcgctggaggcccagtggctggtggacgagattcgcgctctgattcgcgagggccgcccg
gcccgcgagatcgccatcctgtaccgcagcaacgcccagtcgcgcccgatcgagcacgcc
ctgttctccgcccgggtgccgtaccgggtctacggcggccagcgattcttcgagcgccag
gagatcaagcatgtgttggcctatctgcgcctgatcgacaacccggacgacgacacgtcc
tggatgcgggtggtgaactttcccacgcgcgggatcggcgcgcgcaccctggagcagcag
gccgacatcgccgcgcagcagaactccagcctggccggcgctgtcgccttcgtgccgggc
aaggcgggcgccgtgctggcccgttttgccaccttgatccgcgaactggccgaggcggcc
cgtacgctggatctgcccgagctgatcggccacgtcgtgcaccacagcggcctcgaagcc
cactaccgggccgaccgcgaaggacaggaccgtcttgagaacctgcaggaactggtcaat
gccgccgctgccttcgtggccgaggaaggcttccagggcctgcccgccggccgcgtccct
gccgccgcggcggcggccgaggcggcgtccggcccggatgcggcctttgacatgggggcg
gagccgtcgcccgccgtcatgtcgcccctgggcgctttcctcagccacgcctcgctggag
gccggcgataaccaggcgcaggccggcgaggatgccgtgcagctcatgaccgtgcacgcg
gccaagggcctggagttcgacgcggtgttcatcaccgggctcgaagaaggcttgtttccc
catgaaaacagcctgctggacgcgggcggcctggaagaagagcgccgtctcatgtacgtc
gctctcacgcgcgcgcgcgaacgcttgaccctgaccttggcgcaaagccgcatgctgcac
ggccagacgcgctacggcatgcgttcccgcttcctggatgaaatcccggaagagcatctc
aagtggatcacgccgcgccagcgtccggccgccgcccagcctccctggagcggcgccttc
cggcgcggcctgggcggctggcagggcgaggccggcagcagtttcgcgccgcgcgcggcg
cgcacgcagtcctccggcgtcacggtgggcgatcagtgtttccggatcggttcgggggtg
cgccacgggcgcttcggagaaggcaccgtcgtggcgctcagcggcagcggcgccgaggcc
caggcgcgaatcgagttccgcgatgcgggcaccaagacgctggccctgggggtggcgaag
ctggaagtcctggactga
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