KEGG   Castellaniella ginsengisoli: ABRZ00_11295
Entry
ABRZ00_11295      CDS       T10938                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
cgin  Castellaniella ginsengisoli
Pathway
cgin03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cgin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    ABRZ00_11295 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cgin03400]
    ABRZ00_11295 (uvrB)
DNA repair and recombination proteins [BR:cgin03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ABRZ00_11295 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      ABRZ00_11295 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd Helicase_C UvrB ResIII UVR DEAD AAA_30 Kinesin AAA_22 DUF87 Microtub_bd SLFN-g3_helicase
Other DBs
NCBI-ProteinID: XDJ55118
UniProt: A0AB39E6K3
LinkDB
Position
2389721..2391772
AA seq 683 aa
MASGANTPDLVEDSPGFVHFSNSPFQLYQPYPPAGDQPAAIEALEEGVHDGLMCQTLLGV
TGSGKTYTMANLIARTGRPAIVLAPNKTLAAQLYAEMREFFPRNAVEYFVSYYDYYQPEA
YVPSRDLFIEKDSSINEHIEQMRLSATKSLLERPDTIIVGTVSCIYGIGNPGDYHAMVLT
LRTGDRIGRQEILARLVAMQYERNDMEFSRGAFRARGEVIDVFPAEHAEHALRITLFDDE
IESLDLFDPLTGKPVQSLVRFTIFPSSHYVTPRETVLRAIETIKEELRERLAELTAAGRL
VEAQRLEQRTRFDLEMLQELGFCKGIENYSRHLSGALPGEPPPTLIDYLPANALMFIDES
HVTIGQLGGMYRGDRSRKDTLVQFGFRLPSALDNRPLRLEEFEARMPQCVFVSATPGPYE
AQHADQVVEQVVRPTGLVDPEVELRPAITQVDDLLGEAKQRIARHERVLVTTLTKRMAED
LTEYLGENGLKVRYLHSDIDTVERVEIIRDLRLGAFDVLVGINLLREGLDIPEVSLVAIL
DADKEGFLRSERSLIQTIGRAARNLNGRAILYADRVTDSMRRAMDETARRREKQQAFNIE
HGITARGVSKAVRDLIDGVALPATAAPADAGYDESALHDEKSLAKEIRRLEQRMNEHARN
LEFEQAASVRDALRDLKARVLLG
NT seq 2052 nt   +upstreamnt  +downstreamnt
atggcgagtggcgcaaatacccctgacctggtggaggactcaccgggtttcgtgcatttt
tcaaacagtccgttccagctttaccagccgtatccgcccgccggagaccagccggccgcg
atcgaggcgttggaagaaggcgtgcacgacgggctgatgtgccagacgttgctgggggtg
accggctcgggcaagacgtacacgatggccaacctgatcgcccgcaccgggcgcccggcc
atcgtgctggcgcccaacaagaccctggcggcccagctctatgccgaaatgcgcgagttc
ttcccccgcaatgcggtggagtacttcgtgtcctactacgattactaccagcccgaggcc
tacgtgccctcccgcgatctgttcatcgagaaggattcgtccatcaatgaacatatcgaa
caaatgcgcctgtcggcgaccaagagcctgctggagcgccccgacaccatcatcgtgggc
acggtgtcctgcatttacggcatcggcaatccgggcgattatcacgccatggtgctcacg
ctgcgcacgggcgaccggatcggccgccaggaaatcctggcgcggctggtcgccatgcaa
tatgagcgcaacgacatggaattctcccggggggctttccgggcgcgcggcgaggtcatc
gacgtcttcccggccgagcatgcggagcacgccctgcgcatcacattgttcgacgacgag
atcgaatccctcgatctgttcgatcccctgacgggcaagccggttcagagcctggtgcgc
ttcacgatctttcccagttcgcactacgtgacgcctcgcgaaaccgtgctgcgcgccatc
gaaaccatcaaggaagaattgcgcgagcgcctggccgaattgaccgctgccggccggctt
gtcgaggcgcagcggctcgagcagcgcactcgcttcgacctggaaatgctgcaggaactg
gggttttgcaagggcatcgagaattattcccggcacttgtcgggtgcgctgccgggcgag
ccgcccccgacgctgatcgattacctgccggccaacgcgctgatgttcatcgatgaaagc
cacgtcacgatcggccagttgggcggcatgtaccggggagaccggtcccgcaaggatacg
ctggtccagttcggtttccggctgccttcggcgctggacaaccggcccctgcgcctggag
gagttcgaggcgcgcatgccgcagtgcgtgttcgtgtcggccacgccggggccctacgag
gcgcagcatgccgaccaggtggtcgaacaggtggtgcgccccaccgggctggtggatccc
gaagtcgaactcaggccggccatcacgcaggtcgatgatctgctgggcgaggccaagcag
cgcatcgcgcgtcacgaacgggtgctggtcaccacgctgaccaagcgcatggccgaggat
ctgaccgagtatttgggggaaaacggcctcaaggtgcgctacctgcattccgacatcgat
acggtggagcgggtcgagatcatccgcgatctgcgcctgggggccttcgacgtgctggtc
gggatcaacctgctgcgcgaaggcctggacatccccgaggtctccctggtggcaatcctg
gatgccgacaaggaaggctttctgcgttccgagcgcagcctgatccagaccatcgggcgg
gcggcgcgcaatctcaacggacgcgccatcctgtacgccgaccgggtgacggattccatg
cgccgcgccatggatgaaaccgcccgccgccgggaaaagcagcaggctttcaatatcgag
cacggcatcaccgcccggggagtcagcaaggcggtccgcgacctgatcgacggggtggcc
ctgccggccacggcggcgccggccgatgccggctacgacgaatccgccctgcacgacgaa
aagtccctggccaaggaaatccgccgcctggaacagcgcatgaacgagcatgcccgcaac
ctcgaattcgagcaggcggcctccgtgcgggatgccctgcgcgacctgaaggcccgcgtc
ttgctggggtaa

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