Castellaniella ginsengisoli: ABRZ00_13410
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Entry
ABRZ00_13410 CDS
T10938
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
cgin Castellaniella ginsengisoli
Pathway
cgin03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cgin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABRZ00_13410 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgin03400
]
ABRZ00_13410 (xth)
Enzymes [BR:
cgin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
ABRZ00_13410 (xth)
DNA repair and recombination proteins [BR:
cgin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ABRZ00_13410 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
XDJ55517
UniProt:
A0AB39EMA2
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All DBs
Position
2815768..2816553
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AA seq
261 aa
AA seq
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MKLATWNVNSLNVRLGHVLDWLQANPVDALCLQELKLPDDKFPHEVLRAAGYHACWAGQK
TYNGVAILSKTPPLDIQRNIPGYEDEQQRIIAATLTGPDGKPVRVVSAYCPNGQAVGSDK
YAYKLDWFQALRQWLDEEIARHPDLAILGDYNVAPADEDVHDPEAWAGGILVSDPERQAF
RDLLELGFQDTFRLFDQPPRTFSWWDYRRLGFRRNAGLRIDHILATQDLAARCRECTVDK
TPRGWEKPSDHAPVVATFLTA
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgccacctggaatgtcaattctctgaacgtccgcctgggacacgtcctggac
tggctgcaggccaatccggtcgacgcgctgtgtcttcaggaactgaaactgccggacgac
aaattcccgcacgaagtcctgcgggcggccggctaccatgcctgctgggcgggacaaaag
acctacaacggcgtggcgatcctgagcaagacgcccccgctggacatacaacgcaacatc
ccgggctatgaagacgaacagcagcgcatcatcgccgccacgctgaccggccccgacggc
aagcccgtgcgcgtcgtcagcgcctactgccccaacgggcaggcggtgggcagcgacaaa
tacgcctacaagctcgactggttccaggcgctgcgccaatggctggacgaagagatcgcc
cgccatccggacctggcgatcctgggggactacaacgtcgccccggccgatgaggacgtg
cacgaccccgaggcctgggccggcggcatcctggtctccgatcccgagcgccaggcgttc
cgcgacttgctggaactcggtttccaggatacgttccgcctgttcgatcagccgccgcgc
acgttcagttggtgggactaccgccgcctgggtttccggcgcaacgccggcctgcgcatc
gaccacatcctggccacacaggatctggcggcccgctgccgggaatgcacggtggacaag
acgccgcgcggctgggagaaaccgtcggaccacgcgccggtcgtggcgacattcctcacc
gcctga
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