Castellaniella ginsengisoli: ABRZ00_13570
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Entry
ABRZ00_13570 CDS
T10938
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
cgin Castellaniella ginsengisoli
Pathway
cgin03440
Homologous recombination
Brite
Enzymes [BR:
cgin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ABRZ00_13570 (recB)
DNA repair and recombination proteins [BR:
cgin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ABRZ00_13570 (recB)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XDJ55543
UniProt:
A0AB39DXE4
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Position
complement(2849914..2853522)
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AA seq
1202 aa
AA seq
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MSVVPVIPQVDPLRFPLQGSHLIEASAGTGKTWTIAALYVRLVLGHGGQAPRLPTEILVL
TFTEAAAQELRDRIRSRLAEAAVWFAQEAADRPGDPFLESLRQDYPQARRAGCARTLDLA
AQSMDEAAISTIHAWCARVLQEHAFDSGSLFEQRLEPDLGAEIRQAAWDYWRAHVAPLAP
DLLAETLAIWPGPDALLGLSGLLTRESLPAAADESLAAVLAHHLARRQARLAALKAPWAE
QADALEDWLLSLGKNLKVRPSDLRRWTQALRDWAQDPGVIQPDLKAGWDRLTPSGIEEKW
QGDGPAPSHPASAALAGLRAELDSLPAARPPLLRHALGWMAARLRQAMSSAALLGFDGLL
VNLDAALEGAAGIRFAQTLRRQFPVVLIDEFQDTDPVQYRIFDRVYRVAGNDPDTTLVFI
GDPKQSIYGFRGADVHTYLRAARACAGRVQTLGRNYRSSEAMVEAVNRLFSLEDRPAFPT
GMPAVEIPFHPVQAQGRSERWEVLGRQAPAMSACWIEPTAPGKPLSASQYEQEAAELCAR
RVAQTLAQGLCGEAGLRDADRWVPVRPADIAILVNTHAEARSVRQALARVEVRSVYLSER
DSVYESPQAAELALWLGACARPEDERAVRAALATSALGLGWQTLDRLVGDERAWDRQVER
FQAYRQIWQQRGVLPMLRRLLHDFEVPARLLADGYEGERRLTDFLHLAELLQQAAAHLDG
EQAVLRYLHRQIQAPQGEDGRRLRLESDEGLVRVVTVHKSKGLEYPLVFLPFVCKARPIE
PGKGPYLLPGETGREWVMEADAGQLLRLDGERLGEDVRKLYVALTRARHAVWMALGPLRA
GSGIGHVLGADPHAAWTRLTQWHPGLMAWDDTPRADDAGTTPFSGDTMGASEALGDARHL
SAPAVGQAWWISSYSALCLAGAAAPDTAIEDVLRESRQADPEPVDRTIEPLYAPIKSGLA
DFPRGSEAGTFLHGLLEWAARRGFRDLGEARDLIARRCAVRGWEAHIDALHGWLLRFAQT
AWHPDLPDTPVLRLDRLQASLPEMEFWLPAQQVDIERLDALLRRGAFGGATRPALAAGRL
NGMFKGFIDLILQTDGRYYLIDYKSNDLGPREADYAPAALAAAMCASRYDAQMLMYVLAL
HRQLRARRPDYDYARHMGGALYLFLRGQDAPGQGLVALRPAQDLIEALDALFDGAGGEAG
DD
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtggtgcccgtcatcccccaggtggatccgctgcgctttcccttgcagggcagc
catctgatcgaagccagcgccgggaccggcaagacctggacgatcgctgcgttgtacgtt
cgcctggtgctggggcatggcggacaggcgccgcgcctgcccacggaaatcctcgtcctg
accttcaccgaagccgccgcccaggaattgcgcgaccggatccgcagccggctggccgag
gccgccgtctggttcgcccaggaggcggcggatcgcccgggcgatccgttcctggagtct
ctgcggcaagactatccgcaggcccggcgggctgggtgcgcccgcacgctcgatctggcg
gcgcaatccatggacgaggcggcgatttccaccatccatgcctggtgcgcgcgggtgctg
caggagcacgccttcgacagcggcagcctgttcgagcagcggctggaaccggatctgggc
gccgaaatccggcaggcggcctgggattactggcgcgcgcatgtggcgccgctggctccc
gatctgctggccgaaacgctggccatctggcccgggcccgatgccctgctggggctgtcc
ggcctgctgacgcgcgaatccttgcccgctgcggccgatgagagcctggccgccgtcctg
gcgcaccatctggcgcggcggcaggcgcgcctggcggcgctcaaggcgccctgggcggaa
caagcggacgcgctggaagactggctgctttcgttggggaaaaacctcaaggtccggcct
tcggatctgcgccgctggacgcaggcgctgcgggattgggcgcaggatcccggcgtgatc
cagccggacttgaaggccggctgggaccgcttgacgccatcgggaatcgaggagaagtgg
cagggtgacggcccggcgccgtcgcatccggccagcgccgcgctggcgggcctgcgcgcc
gaactggacagcctgcccgccgcgcgcccgccgctgctgcgccacgccctgggctggatg
gccgcgcgtttgcgccaggccatgtccagtgccgcgttgctgggtttcgacggcctgctc
gtgaatctggacgctgccctggagggggcggccggcatccggttcgcacagacgttgcgg
cggcagtttccggtggtgctgatcgacgaattccaggataccgatccggtgcaataccgg
atcttcgaccgcgtctaccgggtggcaggcaacgacccggacaccacgctcgtcttcatc
ggcgatcccaaacagtccatctacggttttcggggcgccgacgtgcacacctacctgcgg
gccgcgagggcctgcgcaggccgggtgcagacgctgggccgcaattaccgctcgtccgaa
gccatggtcgaggcggtcaaccggctcttcagcctggaagaccgcccggcttttccgacc
gggatgccggccgtcgagattcccttccatcccgtccaggcccaggggcgctccgagcgg
tgggaagtgctcggccgccaggccccggccatgagcgcttgctggatcgaaccgaccgcg
ccgggcaaacccctgtccgcctcccagtacgaacaggaggccgccgagctgtgcgcccgg
cgcgtggcgcagaccctggcacagggcttgtgcggcgaggccggcctgcgcgatgcggat
cgatgggtgccggtgcgcccggccgacatcgccatcctggtcaacacccatgccgaggcg
cgcagcgtgcgccaggcgctggcccgggtcgaggtgcgcagcgtctacctgtccgagcgg
gactcggtctatgaatcgccccaggcggcggaactggccttgtggctgggcgcctgcgcc
cgccccgaggacgagcgcgccgtgcgtgcggccctggccacgtcggcgctgggcctgggc
tggcaaaccctggaccggctggtgggggacgagcgcgcctgggatcgccaggtggaacgc
ttccaggcctaccgccagatctggcagcagcgcggcgtattgccgatgctgcgccggctg
ctgcacgatttcgaggtgccggcccggttgctggccgatggctacgagggcgaacggcgc
ctgaccgattttctgcatctggccgagctgctgcagcaggcagccgcccatctggacggc
gagcaggccgtgctgcggtacctgcaccggcagatccaggcgccgcaaggcgaggacggc
cgtcgcctgcggctggaaagcgacgaaggcctggtgcgggtcgtgacggtgcacaaatcc
aaggggctggagtaccccctggtcttcctgcccttcgtctgcaaagcgcgcccgatcgag
ccgggcaaagggccatatctgctgcccggggaaacggggcgggagtgggtcatggaggcg
gatgccggccagttgctgcggctggacggcgagcgtctgggagaggatgtgcgcaagctg
tacgtcgcgttgacgcgggcgcgccatgccgtctggatggcgctggggccgctgcgcgcc
ggcagcggcatcggccatgtgctgggcgcggacccccatgccgcctggacgcgattgacg
cagtggcatcccggcctgatggcctgggacgacacgccccgagcggatgacgccggcacg
acgccgttttccggcgacacgatgggtgcttccgaggcgctgggcgatgcccggcacctg
tcggcgccggcggtcggacaggcttggtggatttccagctactccgccttgtgtctggcc
ggggccgccgcgcccgacacggccatcgaggatgtgctgcgcgagagccggcaggccgat
ccggagccggtggaccggaccatcgagccgctttacgctccgatcaaatcgggcctggcg
gattttccgcgtggcagcgaggcgggcacctttctgcatggcttgctggaatgggcggcg
cggcgcggtttccgcgatctgggcgaggcgcgcgacctgatcgcgcggcgctgcgccgtg
cgcggctgggaagcgcatatcgacgcactgcacggctggctgctgcgcttcgcgcagacg
gcgtggcacccggatttgcccgacacccccgtgctgcgcctggatcgtctgcaggccagc
ttgcctgaaatggagttctggctgccggcgcagcaagtcgacattgaacgcctggacgcg
ctgctgcgtcggggcgccttcggcggcgcgacccgcccggcgctggcggcgggcagattg
aatggcatgttcaaggggttcatcgatctgatcctgcagactgacggccgctattacctg
atcgattacaagtccaacgatctggggcctcgcgaagccgactacgcgcccgcggcgctg
gcggcggccatgtgcgcatcccgctacgatgcgcagatgctgatgtacgtgctggcgttg
caccggcagttgcgcgcccggcggccggattacgattacgcgcgtcacatgggcggcgcg
ctttacctgtttctgcgcggccaggacgcgcccgggcaggggctggtggcgctgcggccc
gcgcaggatctgatcgaggcgctggatgcattgttcgatggcgcgggtggagaggcgggc
gatgactga
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