Corynebacterium glutamicum ATCC 21831: AR0_11325
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Entry
AR0_11325 CDS
T03361
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
cgj
Corynebacterium glutamicum ATCC 21831
Pathway
cgj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AR0_11325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgj03019
]
AR0_11325
03009 Ribosome biogenesis [BR:
cgj03009
]
AR0_11325
Enzymes [BR:
cgj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
AR0_11325
Messenger RNA biogenesis [BR:
cgj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AR0_11325
Ribosome biogenesis [BR:
cgj03009
]
Prokaryotic type
rRNA processing factors
AR0_11325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
S1
Cytidylate_kin
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
AIK88576
LinkDB
All DBs
Position
complement(2384310..2387375)
Genome browser
AA seq
1021 aa
AA seq
DB search
MPNNKAVEAEISPSAVLAAEFDRDSLSEKTRVHQLAKRLGMVSKDVVVALDGIGLVKVAQ
SNLSKEEVEKLLDALSQPVLNAAPAAVPDVEPVEKIRRRVEKNVENEIHQIEEKVERELA
AVAQPTDFEAAAREEATAELLEDIVPEITPAPVEAPVYTPIFVAPAVVPTENVQDTDDEQ
ARERTARKRRGRRGTGRGRGAEAETVTEVSEEASTSEVEEVNEPIGIKGSTRLEAQRRRR
TEMREENKKRRHVVSTQEFMERRESMERRMIVRERQRHDHPGLVTQVGVLEDDQLVEQFV
TSDAQMSMVGNIYLGRVQNVLPSMEAAFIDIGKGRNGVLYAGEVDWKAAGLGGRGRRIEQ
ALKAGDQVLVQVSKDPLGHKGARLTTQISLAGRYLVYVPGGRSAGISRKLPGPERKRLKE
ILGRVVPAQGGTIIRTAAEGVSEENIAADVNRLHTLWEQIKERTAKEKKSRGSKPITMYE
EPDMLVKVIRDLFNEDFTSLIVDGDRAWNTVRAYIQSVAPDLVSRVEHFDRADFDGKDAF
EAFDLNTQLEEALSRKVNLPSGGSLIIDRTEAMTVIDVNTGRYTGKGGGNLEETVTLNNI
EAAEEIVRQMRLRDLGGMIVVDFIDMVLPENQELVLRRLNEALENDRTRHQVSEVTSLGL
VQMTRKRIGAGLLETFSSPCEHCEGRGIIVHVDPVDTVDERVEAKAEERSRRHQRSNSTN
KAAAEHPMVVAMRDLVESDEHDLDQEFEELAASVIVLDDSDLDDVVNDKLDEPERILAES
TVEPEEGPRRRARRQRQESAADDIAAIAAAAVDIASEEDPDEPSGSSYVSDFEAEPIAPV
VEKAAEPVAEPTADYEKARAEFEASPRRRRKTRGNSRSDHAPKPEDFAPVVEEVAETPVK
TPARKAPRRNRPSELSSGAPSSAPSTRNRRRAVRRQLVEAPETVVEIAPEAAPEQVAEPQ
VEFDQPDNRRKRRRAVRVTAAPVEKKVASTSNARAPKKEPQAASTTNPGRRRRATRRGPR
S
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
gtgccaaataacaaggcagtagaagcagaaatctctccctcggctgtgctggccgcggaa
tttgatcgagattcattgagcgaaaaaacccgcgtacatcaactggccaaacgacttgga
atggtttccaaggacgtcgttgttgcgctcgatggcatcggcctggtcaaggttgcgcag
tcaaacctgagcaaagaagaagtagaaaagcttctcgacgccctgtctcagcccgtactc
aacgccgccccagctgccgtccccgacgttgaaccggtggagaagattcgtcgacgcgtt
gagaagaatgtggaaaatgaaatccaccaaatcgaagaaaaagtagagcgcgaactcgcg
gcagtcgcgcaacctaccgacttcgaggcggcagcccgcgaagaagccactgcagaactg
ctggaagatatcgtcccagagatcaccccggcgccggtggaagcacctgtgtacacgccg
atctttgtggcacctgcagttgtacctactgaaaacgtccaagacaccgacgatgaacag
gcccgcgaacgcacggcgcggaagcgccgtgggcgtcgtggcaccggccgcggacgtgga
gctgaagctgaaaccgtcaccgaagtgagtgaggaggcgtcgacaagcgaagtagaagag
gtaaacgagccaatcggaattaagggctccactcgcttggaggcgcaacgccgccgtcgc
acggaaatgcgcgaagaaaacaaaaagcgccgccatgtggtgagcacccaggagttcatg
gaacgccgtgaatcgatggaacgtcgcatgattgtgcgcgagcgccaacgccatgatcac
ccaggtctggtcactcaggttggtgtgctggaagacgatcagctggttgagcagtttgtt
acctctgatgcgcagatgtccatggtgggcaatatttatctggggcgcgttcaaaatgtg
ctgccaagcatggaagctgccttcattgacattggaaaaggtcgcaacggtgtgttgtat
gccggcgaagtcgactggaaagctgctggacttggcggacgtggacgtcgcattgagcag
gcgctgaaagccggcgaccaggttctcgtccaggtctccaaggatccattgggccataag
ggtgcgcgtttgaccacccaaatttccctggcgggacgttacctggtgtacgttccaggt
ggacgcagcgctggcatttcccgcaaactgcctggacctgagcgcaagcgtctgaaggaa
atccttggccgcgttgtcccagcgcagggtggaaccatcatccgaactgctgctgaaggt
gtgtcggaagaaaacatcgcagctgacgtgaaccgtctgcacaccctgtgggagcagatc
aaggaacgcactgcgaaggaaaagaagtcccgcggttccaagccgatcaccatgtatgaa
gagccagacatgctggtgaaggtgatccgtgacctcttcaatgaagatttcacctcactg
atcgttgacggcgaccgtgcctggaacaccgtgcgtgcctacatccaatcagtcgctcct
gatttggtgtcccgcgtggaacacttcgatcgcgcagactttgacggcaaggatgctttc
gaagcatttgacctgaacacccagcttgaggaagcgctgtcccgaaaggtgaacctgcca
tcgggtggatcgctgatcatcgaccgcaccgaagccatgacggtgatcgatgtgaacacc
ggacgctacaccggcaagggtggtggcaacttggaagaaaccgtcacgctcaacaacatt
gaagctgccgaagaaatcgtgcgccaaatgcgcctgcgtgatctcggtggcatgatcgtt
gtcgacttcatcgatatggtgctgccagaaaaccaagaattggtcctgcgccgactcaat
gaagcgctagaaaacgatcgcacccgccaccaagtctctgaggtaacctcactgggactt
gttcagatgacccgcaaacgcatcggcgcgggcctgctggaaaccttctcttcaccgtgt
gagcactgtgaaggccgaggcatcatcgttcatgttgatccagtagacaccgttgacgag
cgcgttgaggcgaaagcagaagagcgtagccgtcgtcaccagcgttccaatagcactaac
aaggcagctgcggagcacccgatggttgttgccatgcgtgatctcgtggaaagcgatgaa
cacgatctggatcaagaatttgaggaactcgctgcatcagtgatcgtcctcgatgactcc
gatctagatgatgtggtcaacgacaagctcgacgagcctgagcgtattcttgctgaatcc
accgtggaaccagaggaaggaccacgcaggagggcccgccgtcaacgtcaggaatctgct
gcggatgatattgcagcgattgcagctgctgccgtggacattgcttctgaagaagaccct
gatgagccttcgggatcgtcgtatgtgtctgactttgaggcagagcctattgcacctgta
gttgagaaggctgctgaacctgtggctgagccaaccgctgattatgaaaaggcacgtgcc
gaatttgaggcaagcccacgcaggcgccgcaagactcgtggcaattcacgttcggatcat
gctccaaagccagaggatttcgcacctgtggttgaagaggttgctgagactccagtgaag
acacctgcgcggaaggctccacgccgtaaccgtccaagtgagctcagttccggtgcgccg
tcctctgcaccatcgaccaggaaccgtcgccgcgcagtgcgccgtcaactggtggaagct
cctgagaccgtcgttgagatagcacctgaagcagcaccagaacaggttgcagagcctcag
gttgaattcgaccagccagacaaccgccgaaagcgtcgtcgtgctgtgcgcgtgacagcg
gcgccggtggagaagaaggtggcgtcgacaagcaatgcgcgggcgccgaagaaggaacct
caggcggcgagcaccaccaacccaggccgccgtaggcgggctacccgacgaggcccacga
agctag
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