Corynebacterium glutamicum ATCC 21831: AR0_14540
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Entry
AR0_14540 CDS
T03361
Name
(GenBank) transferase
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
cgj
Corynebacterium glutamicum ATCC 21831
Brite
KEGG Orthology (KO) [BR:
cgj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgj03016
]
AR0_14540
Enzymes [BR:
cgj01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
AR0_14540
Transfer RNA biogenesis [BR:
cgj03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
AR0_14540
Prokaryotic type
tRNA splicing ligases
AR0_14540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AIK89158
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All DBs
Position
3073074..3074225
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AA seq
383 aa
AA seq
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MNHVVNFASHLEDAALKQAEATATMPFIYPHVALMPDAHFGLGSSVGTVFGTKGAIIPAA
VGVDIGCGMIGVCTNYTASDLEGRDLVTLRDYIERVIPLSPGNYNSTTLKETAKVKVAEL
EELAERDGVDLSHSPTWKRQLGSLGGGNHFIELCLDELDRVWMFLHSGSRGVGNKIAQKH
IKIAQAECKNEDLPDKDLAYLTEGTEEFESYIKELNWAQRFAFLNREEMMDRFARELGFF
VDKQLEEVERINCHHNYTVREEHYGETIWLTRKGAVLADEGTPALIPGSMGTASYVVSGK
GNAEALRSAPHGAGRRMSRNQAKKRFSTADLDSRMAGIVYRPGKEWIDEIPDAYKDIDQV
MADAADLVTIRHKLRQIVNVKGT
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatgttgttaattttgcttcacatttggaagacgcagccctgaagcaagccgaa
gctactgccaccatgccgtttatttacccgcatgtggcgttgatgcctgatgctcacttt
gggttgggttcgtcggtgggaacggtgttcggcaccaagggtgcgatcattccggcggct
gtgggtgtggatataggttgcggaatgataggagtgtgtaccaattacacggcctctgac
ctggagggacgtgatttggtgacgcttcgggattacatcgagcgggtgattccgttgtct
cctggaaattacaattccaccaccttgaaggaaaccgcgaaggtgaaggtcgcggagttg
gaggagctcgcggagcgcgatggtgtggatttgtcgcactctccgacgtggaagcgccag
ttgggttcgcttggtggaggtaatcacttcattgagttgtgtcttgatgagttggatcgg
gtgtggatgtttttgcactctggttcccgcggtgtgggtaacaagattgcccagaagcac
atcaagatcgcgcaggctgagtgtaagaatgaggaccttcccgataaggatcttgcgtac
ttgaccgaggggactgaggagtttgagtcttacatcaaggaactgaattgggcgcagcgt
tttgcgttcctcaacagggaagaaatgatggacagattcgcacgggagctgggttttttc
gtcgacaagcagcttgaagaggtcgagcgcatcaactgccaccacaactacacggtccgg
gaggagcactacggcgagaccatttggctcacccgtaagggtgccgtgttagcggacgaa
ggcacgccggcattgattccggggtcgatgggcaccgcgtcgtacgtggtcagcggcaag
ggcaacgccgaggcactgcggtcagcgccgcatggggcgggccggaggatgtcgcgcaac
caagctaaaaagcgcttctcgacggctgacctggattctcggatggcgggcatcgtctac
cggcccggcaaggagtggatcgatgaaattcccgacgcttacaaagacatcgatcaggtg
atggccgatgctgccgatttggtgacaattcgccataaattgcgccagatcgtcaacgtg
aaaggcacctaa
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