Corynebacterium geronticis: CGERO_04585
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Entry
CGERO_04585 CDS
T06788
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
cgk
Corynebacterium geronticis
Pathway
cgk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CGERO_04585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgk03021
]
CGERO_04585
03019 Messenger RNA biogenesis [BR:
cgk03019
]
CGERO_04585
Transcription machinery [BR:
cgk03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CGERO_04585
Messenger RNA biogenesis [BR:
cgk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CGERO_04585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
NACHT
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AZA11233
UniProt:
A0A3G6J0C0
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All DBs
Position
952568..954469
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AA seq
633 aa
AA seq
DB search
MSQTDQGATRQEANLAGLRLPELRKIAAQMGLRGVSALRKNDLIAAIKGAQSGDQQTVEH
SVRKGKQRVYGEENESKDNKAPESDTKTEAKEAGQEQEEHHGRGRRRRAVRASHVDPAEQ
QETSEESKDDADEQRYESRSAARRARRNRARRDQQDEPRQEQRQEQRHDENDESADAADN
LEARNNNRDNRENRENRDNRGQRNNRDDSNERGNRRNRRNRRGRDDNRNDNRDNRDNRNE
QNQGREDENLLDVAGILDIVDNNVAFIRTTGYHSGPADVYVNSQMVRRFGLRAGDAIIGK
ARPNNDQGGRGRNRQKYNPLVRVESVNGVGVEEAKQRPQFSKLTPLYPNQRLRLETDPKV
LTTRVIDLIMPIGKGQRALIVSPPKAGKTTILQNIANAIATNNPECYLMVVLVDERPEEV
TDMQRSVKGEVIASTFDRPPSEHTAVAELAIERAKRLVEQGMDVVVLLDSITRLGRAYNN
SSPASGRILSGGVDSNALYPPKRFLGAARNIENGGSLTIIATAMVETGSAGDTVIFEEFK
GTGNAELKLDRKISERRVFPAVDVNPSGTRKDELLLPPEEARVMHKLRRILSALDSQAAI
DLLIKQLKKTRNNGEFLMQVMSSAPMAADSEEE
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
gtgagccaaacagatcaaggcgctacgcgccaagaagcgaacttagcgggactccgtctg
ccggaattgcgcaagatcgcggcccaaatgggccttcggggggtatccgcattgcgcaag
aacgacttgatcgcggcgatcaagggtgcgcaatccggtgaccagcagacggtcgaacat
agcgtgcgcaaaggcaagcagcgcgtgtatggggaggaaaacgaatctaaggacaacaag
gctcccgagtctgatactaagaccgaagccaaagaagccggccaagagcaggaagaacac
catggtcgcggacgtcgtcgccgtgccgtgcgggcttcacacgtcgatcctgcggagcag
caggagacgagtgaagaatcgaaggacgatgccgatgagcagcgctatgaatctcgctcg
gcagctcgtcgtgcgcgccggaacagggcgcgccgcgatcaacaggacgagcctcgtcag
gaacagcgccaagaacaacgccacgacgaaaacgacgaatctgcggatgcggcagacaac
cttgaggcgcgcaacaacaaccgcgacaaccgcgagaaccgcgagaaccgcgacaaccgc
ggccagcgcaacaaccgcgacgacagcaacgaacgtggcaaccgtcggaaccgtcgcaac
cgccgtggtcgcgacgataatcgcaacgacaatcgagacaaccgcgacaacagaaacgaa
cagaaccagggtcgcgaagatgaaaacctactcgacgtggccggcatcctggacattgtg
gacaacaacgtggccttcatccgcaccaccggctaccactcgggtcccgccgatgtgtac
gtgaactcccagatggttcgtcgcttcggtcttcgtgccggtgacgccatcatcggcaag
gctcgccccaacaacgatcagggcggtcgtgggcgcaaccgccagaagtacaacccgctg
gtgcgcgtcgaatcggtcaatggcgttggcgttgaagaagcgaagcagcgcccgcagttt
tccaagctcactccgctgtacccaaaccagcgcctgcgcctggaaactgatccgaaggtg
ctcaccacccgtgtgattgacctgatcatgccgattggcaagggccagcgtgccctgatc
gtgtctccaccgaaggctggtaagaccacgatcttgcagaacattgcgaatgcgatcgct
acgaataaccccgagtgctacctcatggtggtgctggtggacgagcgtccggaagaagtg
acggacatgcagcgaagcgtcaagggcgaggtgattgcctctaccttcgaccgtccacca
agcgaacacaccgctgtggctgagcttgccattgagcgcgccaagcgcctggtggagcag
gggatggacgtggtggtcttgctggactccattactcgtttgggtcgcgcctacaacaac
agctccccggcgtccggccgcatcctttccggcggtgtggactccaacgctttgtacccg
ccgaagcgcttcttgggcgcagcccgcaatatcgaaaacggcggatcgctcacaatcatc
gccaccgcaatggtggagaccggctccgctggcgacaccgtgattttcgaggagttcaag
ggcaccggcaacgcagagctcaagctggatcgcaagatctccgagcgccgcgtgttcccg
gccgtggatgtcaatccttccggcacccgcaaggacgaactgctgctgcctccagaggaa
gcgcgtgtgatgcacaagctgcgccgcatcctctccgcgttggattctcaggctgctatt
gatctgttgattaagcagttgaagaagacccgcaacaatggcgagttcctcatgcaggtg
atgtcttcggctccaatggctgccgattcggaagaggagtaa
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