KEGG   Corynebacterium geronticis: CGERO_05040
Entry
CGERO_05040       CDS       T06788                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
cgk  Corynebacterium geronticis
Pathway
cgk03030  DNA replication
cgk03410  Base excision repair
cgk03420  Nucleotide excision repair
cgk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cgk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CGERO_05040 (polA)
   03410 Base excision repair
    CGERO_05040 (polA)
   03420 Nucleotide excision repair
    CGERO_05040 (polA)
   03440 Homologous recombination
    CGERO_05040 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cgk03032]
    CGERO_05040 (polA)
   03400 DNA repair and recombination proteins [BR:cgk03400]
    CGERO_05040 (polA)
Enzymes [BR:cgk01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CGERO_05040 (polA)
DNA replication proteins [BR:cgk03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CGERO_05040 (polA)
DNA repair and recombination proteins [BR:cgk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     CGERO_05040 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CGERO_05040 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 HHH_2 ADAMTSL1
Other DBs
NCBI-ProteinID: AZA11320
UniProt: A0A3G6J4H7
LinkDB
Position
1042993..1045668
AA seq 891 aa
MFRLGRVTESRRLMLIDGHSMAFRAFFAIPSENFSTSGGQTTNAVYGFLGMLSSLVAEQQ
PTHLAVAFDVGRKTFRSEKFPAYKAQRDATPPEFKGQISLIKEVLDALGVTHLEKEKFEA
DDIIATLSTAATGQGFRTQIVTGDRDSFQLVNDHVTVLYPKRGVSDLIHYTPEAIEEKYG
LTPAQYPEFAALRGDPSDNLPSIPRVGEKTATKWIQQYGDLESLLTHAYEIKGMAGENLR
AAIDQVRTNFELTQMVRDLELPLGPEQLQRKDIDVNAVARSFDSLEFGVNLRERVFNSFG
VDGSAVDADKAPDLQLEHDAVDTWLAAHAEQALALVVEGQAVPGAGDASAFALCDESYRG
IVASFENLNPSEEQALGDWLASDAPKFVHGAKAHFHMLQARGFDLDGVEHDTEIAAYLLR
PGQRTYELKDVFQRHLQRQLASEASSGQLSLLDVADNQELLAHAAAVMELAQTLAEQLVA
IDAYELYRDLEIPLAGILGGMEAIGIAVDVETLQEQLEDFKAMVAEEEEQARKLVDEPTL
NLSSPKQLQSVLFDTLGLPKTKKTKTGYSTAAKEIDALAAKNPHPFLDHLLAHREYTKMK
STIEGLIRAVGEDGRIHTTFHQTKASTGRLSSTDPNLQNIPVRTEAGRKIRSAFTVGEGY
ECLLTADYSQIEMRVMAHLSEDAGLIEAYQNGEDLHNYVGSRVFDVPVGEVTPELRRRVK
AMSYGLVYGLSAFGLSQQLGIAAGEAKAIMESYFQRFGGVKRYLDEVVEQARHDGYTATL
FGRRRYLPELTSENRVARETAERAALNAPIQGTAADIIKVAMIRVDRELREANVRSRVLL
QVHDELVVEVAPGERELVQSIVEREMDAAVELTVPLEVASGVGEDWEEAAH
NT seq 2676 nt   +upstreamnt  +downstreamnt
gtgtttagactagggcgcgtgactgaatctcgacgtttgatgcttatcgacggccactcg
atggcgtttcgtgcctttttcgccattccctcggagaatttctcaacctccggcggccag
acaaccaatgccgtgtacggctttttgggcatgctgtcttccctggtggccgagcagcaa
cctacccacttggcggtggcgttcgacgttgggcgaaagacgtttcgctcggagaagttc
ccggcgtataaagcgcagcgtgatgcgacgccgccagagttcaagggtcaaatttcgctc
atcaaggaggttcttgacgctctcggagtgacccatttggaaaaagagaaattcgaggcc
gatgacatcatcgccaccttgtccaccgcggccacagggcaaggttttcgtactcagatt
gtgactggcgatcgcgattccttccaattagtcaatgaccatgtgacggtgctgtatcca
aagcgcggcgtatcggatctgattcattacactcctgaggcgattgaagaaaagtatggg
ctcacacctgcgcagtacccagagtttgccgcattgcgcggggatccatcagacaatctg
ccgagcattccgcgagttggagaaaagacggccaccaagtggattcagcagtacggggat
ctggaaagcttgctcactcacgcctacgagatcaaaggcatggcgggcgagaatctacgc
gcggccatcgatcaagttcgcaccaattttgaactgacgcagatggttcgcgacctggaa
cttccgttgggtcccgagcaactgcaacgcaaggacatcgatgtcaatgcggtggcccgg
agctttgattcgctggagtttggagtgaatcttcgcgaaagggtgttcaactccttcggc
gtcgacggtagtgcggtagatgcggacaaggctcctgatcttcaactcgaacatgacgct
gtggacacttggctagcggcccatgcagaacaagcattggcgctcgtggttgaggggcag
gcagtaccgggtgctggcgatgcctcggcgttcgccctttgcgatgagtcttatcgaggc
atcgtcgcatcctttgaaaacctcaacccctctgaagagcaggctcttggcgattggctc
gccagcgacgccccgaaatttgttcacggagccaaggctcatttccatatgctgcaggcg
cgtggatttgaccttgatggggtggagcacgacaccgagatcgctgcctatctcctgcgc
ccagggcagcgtacatatgagctcaaagacgtattccagcgccacctgcagcggcaatta
gccagcgaagcgtcaagtggtcaactctccctgcttgacgttgccgataatcaggaactg
ctcgcgcacgcggctgccgtgatggaattggcgcagacgctggcagaacagctcgtcgca
atcgacgcctacgagctctaccgtgatttggagattccactcgcggggatcctgggaggc
atggaggcgatcgggattgccgtcgatgtggagacgctccaggagcagctcgaagacttc
aaggccatggtcgccgaagaagaggagcaagcccgcaaacttgtcgatgaacccacgttg
aacctttccagcccgaagcaactgcaatccgtgctctttgacacgctgggtctgccgaaa
acgaaaaagaccaaaaccggctattcaacggcggcgaaagaaattgatgcgcttgccgcc
aagaatccgcatccattcctggaccacctgctagcgcatcgcgaatacaccaagatgaag
tccacgattgaggggctcattcgtgccgtcggggaagatgggcggattcacacaaccttc
caccaaacgaaggcctccactggccgcctgagttccaccgatccgaacctgcaaaatatt
ccggtgcgcaccgaggccggtagaaagattcgctcggcgttcaccgtaggtgaggggtac
gagtgcttgctcactgctgactactcgcaaattgagatgcgcgtgatggcgcatctttct
gaagacgcaggattgattgaggcgtaccaaaatggcgaggacttgcacaattacgtgggc
tcgcgcgtctttgatgtcccggttggtgaagtgactccagaactgcggcgtcgggttaaa
gcaatgagctacggactggtctatggtctgtctgcattcggtctttctcaacagctcggc
atcgctgccggggaagcaaaggccattatggaaagctacttccagcgtttcggcggcgta
aagcgttacctggatgaagtggtggagcaggcgcgacacgatggttacactgcgacgctg
tttgggcgccgtcgataccttcccgagctcacctccgagaaccgcgtggcgcgagaaact
gcagagcgcgctgccctgaacgcccctatccagggaactgccgccgacattattaaggtg
gcgatgatccgcgtcgatcgggaactgagggaggctaacgtgcgctcgcgtgtgctcctc
caagtccatgacgaattggtggtggaagttgcccccggtgagcgagagttggtgcagagc
atcgttgagcgcgaaatggacgcggcagtagaacttactgtgcccctggaggttgcaagc
ggtgttggtgaggactgggaggaagctgctcactaa

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