Corynebacterium geronticis: CGERO_05040
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Entry
CGERO_05040 CDS
T06788
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cgk
Corynebacterium geronticis
Pathway
cgk03030
DNA replication
cgk03410
Base excision repair
cgk03420
Nucleotide excision repair
cgk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cgk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CGERO_05040 (polA)
03410 Base excision repair
CGERO_05040 (polA)
03420 Nucleotide excision repair
CGERO_05040 (polA)
03440 Homologous recombination
CGERO_05040 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgk03032
]
CGERO_05040 (polA)
03400 DNA repair and recombination proteins [BR:
cgk03400
]
CGERO_05040 (polA)
Enzymes [BR:
cgk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CGERO_05040 (polA)
DNA replication proteins [BR:
cgk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CGERO_05040 (polA)
DNA repair and recombination proteins [BR:
cgk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CGERO_05040 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CGERO_05040 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_2
ADAMTSL1
Motif
Other DBs
NCBI-ProteinID:
AZA11320
UniProt:
A0A3G6J4H7
LinkDB
All DBs
Position
1042993..1045668
Genome browser
AA seq
891 aa
AA seq
DB search
MFRLGRVTESRRLMLIDGHSMAFRAFFAIPSENFSTSGGQTTNAVYGFLGMLSSLVAEQQ
PTHLAVAFDVGRKTFRSEKFPAYKAQRDATPPEFKGQISLIKEVLDALGVTHLEKEKFEA
DDIIATLSTAATGQGFRTQIVTGDRDSFQLVNDHVTVLYPKRGVSDLIHYTPEAIEEKYG
LTPAQYPEFAALRGDPSDNLPSIPRVGEKTATKWIQQYGDLESLLTHAYEIKGMAGENLR
AAIDQVRTNFELTQMVRDLELPLGPEQLQRKDIDVNAVARSFDSLEFGVNLRERVFNSFG
VDGSAVDADKAPDLQLEHDAVDTWLAAHAEQALALVVEGQAVPGAGDASAFALCDESYRG
IVASFENLNPSEEQALGDWLASDAPKFVHGAKAHFHMLQARGFDLDGVEHDTEIAAYLLR
PGQRTYELKDVFQRHLQRQLASEASSGQLSLLDVADNQELLAHAAAVMELAQTLAEQLVA
IDAYELYRDLEIPLAGILGGMEAIGIAVDVETLQEQLEDFKAMVAEEEEQARKLVDEPTL
NLSSPKQLQSVLFDTLGLPKTKKTKTGYSTAAKEIDALAAKNPHPFLDHLLAHREYTKMK
STIEGLIRAVGEDGRIHTTFHQTKASTGRLSSTDPNLQNIPVRTEAGRKIRSAFTVGEGY
ECLLTADYSQIEMRVMAHLSEDAGLIEAYQNGEDLHNYVGSRVFDVPVGEVTPELRRRVK
AMSYGLVYGLSAFGLSQQLGIAAGEAKAIMESYFQRFGGVKRYLDEVVEQARHDGYTATL
FGRRRYLPELTSENRVARETAERAALNAPIQGTAADIIKVAMIRVDRELREANVRSRVLL
QVHDELVVEVAPGERELVQSIVEREMDAAVELTVPLEVASGVGEDWEEAAH
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
gtgtttagactagggcgcgtgactgaatctcgacgtttgatgcttatcgacggccactcg
atggcgtttcgtgcctttttcgccattccctcggagaatttctcaacctccggcggccag
acaaccaatgccgtgtacggctttttgggcatgctgtcttccctggtggccgagcagcaa
cctacccacttggcggtggcgttcgacgttgggcgaaagacgtttcgctcggagaagttc
ccggcgtataaagcgcagcgtgatgcgacgccgccagagttcaagggtcaaatttcgctc
atcaaggaggttcttgacgctctcggagtgacccatttggaaaaagagaaattcgaggcc
gatgacatcatcgccaccttgtccaccgcggccacagggcaaggttttcgtactcagatt
gtgactggcgatcgcgattccttccaattagtcaatgaccatgtgacggtgctgtatcca
aagcgcggcgtatcggatctgattcattacactcctgaggcgattgaagaaaagtatggg
ctcacacctgcgcagtacccagagtttgccgcattgcgcggggatccatcagacaatctg
ccgagcattccgcgagttggagaaaagacggccaccaagtggattcagcagtacggggat
ctggaaagcttgctcactcacgcctacgagatcaaaggcatggcgggcgagaatctacgc
gcggccatcgatcaagttcgcaccaattttgaactgacgcagatggttcgcgacctggaa
cttccgttgggtcccgagcaactgcaacgcaaggacatcgatgtcaatgcggtggcccgg
agctttgattcgctggagtttggagtgaatcttcgcgaaagggtgttcaactccttcggc
gtcgacggtagtgcggtagatgcggacaaggctcctgatcttcaactcgaacatgacgct
gtggacacttggctagcggcccatgcagaacaagcattggcgctcgtggttgaggggcag
gcagtaccgggtgctggcgatgcctcggcgttcgccctttgcgatgagtcttatcgaggc
atcgtcgcatcctttgaaaacctcaacccctctgaagagcaggctcttggcgattggctc
gccagcgacgccccgaaatttgttcacggagccaaggctcatttccatatgctgcaggcg
cgtggatttgaccttgatggggtggagcacgacaccgagatcgctgcctatctcctgcgc
ccagggcagcgtacatatgagctcaaagacgtattccagcgccacctgcagcggcaatta
gccagcgaagcgtcaagtggtcaactctccctgcttgacgttgccgataatcaggaactg
ctcgcgcacgcggctgccgtgatggaattggcgcagacgctggcagaacagctcgtcgca
atcgacgcctacgagctctaccgtgatttggagattccactcgcggggatcctgggaggc
atggaggcgatcgggattgccgtcgatgtggagacgctccaggagcagctcgaagacttc
aaggccatggtcgccgaagaagaggagcaagcccgcaaacttgtcgatgaacccacgttg
aacctttccagcccgaagcaactgcaatccgtgctctttgacacgctgggtctgccgaaa
acgaaaaagaccaaaaccggctattcaacggcggcgaaagaaattgatgcgcttgccgcc
aagaatccgcatccattcctggaccacctgctagcgcatcgcgaatacaccaagatgaag
tccacgattgaggggctcattcgtgccgtcggggaagatgggcggattcacacaaccttc
caccaaacgaaggcctccactggccgcctgagttccaccgatccgaacctgcaaaatatt
ccggtgcgcaccgaggccggtagaaagattcgctcggcgttcaccgtaggtgaggggtac
gagtgcttgctcactgctgactactcgcaaattgagatgcgcgtgatggcgcatctttct
gaagacgcaggattgattgaggcgtaccaaaatggcgaggacttgcacaattacgtgggc
tcgcgcgtctttgatgtcccggttggtgaagtgactccagaactgcggcgtcgggttaaa
gcaatgagctacggactggtctatggtctgtctgcattcggtctttctcaacagctcggc
atcgctgccggggaagcaaaggccattatggaaagctacttccagcgtttcggcggcgta
aagcgttacctggatgaagtggtggagcaggcgcgacacgatggttacactgcgacgctg
tttgggcgccgtcgataccttcccgagctcacctccgagaaccgcgtggcgcgagaaact
gcagagcgcgctgccctgaacgcccctatccagggaactgccgccgacattattaaggtg
gcgatgatccgcgtcgatcgggaactgagggaggctaacgtgcgctcgcgtgtgctcctc
caagtccatgacgaattggtggtggaagttgcccccggtgagcgagagttggtgcagagc
atcgttgagcgcgaaatggacgcggcagtagaacttactgtgcccctggaggttgcaagc
ggtgttggtgaggactgggaggaagctgctcactaa
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