Corynebacterium geronticis: CGERO_06340
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Entry
CGERO_06340 CDS
T06788
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cgk
Corynebacterium geronticis
Brite
KEGG Orthology (KO) [BR:
cgk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgk03016
]
CGERO_06340 (rnd)
Enzymes [BR:
cgk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CGERO_06340 (rnd)
Transfer RNA biogenesis [BR:
cgk03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CGERO_06340 (rnd)
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
AZA11568
UniProt:
A0A3G6J3M2
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Position
1327605..1328774
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AA seq
389 aa
AA seq
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MPTMLNIPREGIPKLSVTPGQMRKAERRLRAGTGRIAVDTERAGGFRYDDRAFLLQLRRS
GSGTLLIDTETHREIVAPALAEALTTEWVLHDASTDLPSLRALGLKPTGIFDTAIAARLL
NIMPYRLPELCAHFLGVTMRNNHGQEDWSRRPLPQSWLNYAALDVEMLLELADACEAALA
QAGKLDWAAQEFTHILQIPSPQPSWETSKPARTLKRPQELAIVRGLWQRRDTMAQAMDVA
AHRVLPDKAIVAIAKAQPSSVGQLARLPDFPAELRRHAGQWLAASQAGLSQRPWPKAHAR
PSTPSQRDWEKKYPDTFAIAREAETLLGALHQKVNVHEDSIVSRKALRSILWAIMHRGVS
PEEAQQQLALRPWQMELITPLLAAVLPAT
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccatgctaaatatcccccgggaggggataccgaagctcagcgtaacaccgggc
caaatgcgcaaggcagagcgacggcttcgagctggcaccggacgcatcgctgtggatact
gaacgcgcgggcgggtttcgctatgacgaccgcgccttcttgctacagcttcgccgttcg
ggttccggcactcttcttattgacaccgaaacgcaccgggagatcgtcgcaccagcgctt
gcagaggcactcactaccgaatgggttctgcacgacgcatcgacggatctacccagtcta
cgggcccttgggctcaaacccaccggaattttcgatacagctattgcagctcgcctattg
aatatcatgccgtaccgactgccggaactgtgtgcgcatttcctcggggtgacgatgcgg
aacaaccacggacaggaagattggtctcgtcgtccgctcccacaatcctggctgaattac
gctgcattggacgtggaaatgctcctcgagctggcagatgcctgcgaggctgcgcttgct
caggcgggaaagttggactgggcagcccaagagttcacacacattctgcagattccctcg
ccacaaccttcttgggagacctcaaaaccggcgagaaccttgaaacggcctcaggaactc
gccatcgttcgcggactttggcagcgacgagacacgatggctcaggcgatggatgtggct
gcacaccgcgtattacctgacaaagcaatcgttgcgattgcgaaggcccaaccgagctct
gtcgggcagttggcacgattgccggactttcccgcggagctccgccggcacgcgggtcaa
tggcttgccgcttctcaggcgggactgtcgcagcggccctggcctaaagctcatgcccgc
ccaagtacaccaagccaacgcgattgggagaaaaaatatcccgatactttcgcaatagcg
cgcgaagccgaaacattactgggagcgctccaccagaaagttaacgtgcatgaggacagc
atcgttagccgtaaagcgctcaggtcgatcttgtgggcgatcatgcaccgcggagtgagc
cctgaagaagcacagcagcagctagcattgcgtccctggcaaatggagctgatcacaccg
cttttggccgctgtgctgccagcaacctag
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