Corynebacterium geronticis: CGERO_06405
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Entry
CGERO_06405 CDS
T06788
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
cgk
Corynebacterium geronticis
Brite
KEGG Orthology (KO) [BR:
cgk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgk03021
]
CGERO_06405 (sigB)
Transcription machinery [BR:
cgk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CGERO_06405 (sigB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AZA11581
UniProt:
A0A3G6J0L4
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All DBs
Position
1340767..1341756
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AA seq
329 aa
AA seq
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MTNSSSKDFDSEDVDRGSRRGHTNDNPSADLVRVYLNGIGKTALLNAEQEVELAQTIEVG
LYAEHLLADPDRHLTRAMKRDLKHLVKEGRKARSHLLEANLRLVVSLAKRYTNRGMPLLD
LIQEGNLGLIRAMEKFDYTKGFKFSTYATWWIRQAITRGMADQSRTIRLPVHLVEQVNKL
SRIKREMYQHLGREATNEELAEESGIEEAKVEMLLRQSRDPVSLDMPVGADEEAPLGDFI
EDSEATDAEAAVVASLRHSDIRMVLGTLEQREQDVIRLRYGLDDGVPRTLDQIGRQFGLS
RERVRQIEREVMAKLRDGDRAAKLRAYAF
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgacgaactcttcatctaaagatttcgactccgaggatgtggaccgcggcagccgccga
ggccacaccaacgataatccctcagcggacttggtgagggtgtacctcaacggcatcggc
aagacggccctgttgaacgcggagcaagaagtggaacttgcccagacaatcgaagtgggc
ttgtatgcagagcacctgcttgcggatcccgatcgtcatctcacccgcgcaatgaagcgc
gatttaaaacatttggtcaaagagggccgaaaagctcgttcacacctgctagaagcaaat
ttgcgccttgtggtgtctttggccaaacgctacaccaatcgcggtatgcccttgttggat
ttgatccaagagggcaacctcggcctcatccgcgctatggagaagttcgactacaccaag
gggtttaagttctccacctacgcaacctggtggatccgtcaagcgatcactcgcggcatg
gccgatcaatcccggacgatccgtctgcccgtccaccttgttgaacaagtgaacaaactc
tccaggattaagcgcgagatgtatcaacatctcggccgtgaggcgacgaatgaggagctg
gcggaagaatcaggtatcgaagaagcaaaggttgagatgctgcttcggcagtctcgagat
ccggtgagtttggatatgccggtgggcgcggacgaagaagcgccgctcggcgacttcatc
gaggattccgaggccaccgatgccgaagccgccgtcgtggcatcgctgcgccattcggat
atccggatggtattgggcacgcttgagcagcgcgaacaggacgtcattcggttgcgctat
ggcctcgacgatggtgttccgcgcaccctcgaccagattggccgtcagtttggtttatcc
agggagcgcgtgcgtcagatcgagcgagaggtgatggcaaagcttcgcgatggcgatcga
gcggcgaagttgcgcgcatacgctttctag
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