Corynebacterium geronticis: CGERO_07245
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Entry
CGERO_07245 CDS
T06788
Symbol
dnaE2
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cgk
Corynebacterium geronticis
Pathway
cgk03030
DNA replication
cgk03430
Mismatch repair
cgk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cgk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CGERO_07245 (dnaE2)
03430 Mismatch repair
CGERO_07245 (dnaE2)
03440 Homologous recombination
CGERO_07245 (dnaE2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgk03032
]
CGERO_07245 (dnaE2)
03400 DNA repair and recombination proteins [BR:
cgk03400
]
CGERO_07245 (dnaE2)
Enzymes [BR:
cgk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CGERO_07245 (dnaE2)
DNA replication proteins [BR:
cgk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CGERO_07245 (dnaE2)
DNA repair and recombination proteins [BR:
cgk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CGERO_07245 (dnaE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AZA11749
UniProt:
A0A3G6J1C1
LinkDB
All DBs
Position
complement(1528262..1531822)
Genome browser
AA seq
1186 aa
AA seq
DB search
MAKQSSFVHLHNHTEYSMLDGMAKVDMLAEEVSRQGMPAVGMTDHGNMFGTDAFYRAMCD
AGVKPIIGIEAYMAPESRFNKERIRWGEPHQKSDDISASGAYLHQTMLAENAEGLHNLFY
LSSMASYEGQLGKWPRMDAELIAEHASGIIATTGCPSGDVQTRLRLGQFDAALEAAAMWQ
DIYGKDNYFLELMDHGLDIERRVRNELLEIGRKLDLPPLVTNDCHYVLESQAKAHEAMLC
VQTGKTLNDPDRFKFDGTGYYIKSAKQMREIWDDTVPDGCDNTLWIAERVQDYGEIWESH
PHDRMPIADVPEGHTPTTWLRHEVLEGLKERFDGGEVPKEYIDRADYEIDVIDMKGYPSY
FLIVAELIKHARSIGIRVGPGRGSAAGALVAYALTITNIDPIEHGLLFERFLNPERPSAP
DIDIDFDDRRRGEMIRYASDRWGEDKIAQVITFGTVKTKQALKDSARVQYGQPGYQIADK
ITKELPPPIMAKDIPLSGIKDPNHPRYAEAGEVRKLIETDPDVQKIYDTAVGLEGVIRQP
GVHACAVIMASVPLLDHIPMWKRAADGALITGWPYPACEAIGLLKMDFLGLRNLTVIGDA
LENIKANRGEEIDLEALETDDPKVYELLSGGHTLGVFQLDSGGMQELLKRMQPTGFNDIV
ASLALYRPGPMGVNAHNDYADRKNGRKPIEPIHPELEEALKDILEETYGLIVYQEQIMEI
SRKLANYTAGEADGFRKAMGKKKPEVLAKEYAKFSQGMFDNGFSKAAVDALWGTIEPFAS
YAFNKSHAAGYGLVSYWTAYLKANYTAEYMAALLTSVADKKNKSALYLADCRHLGISVLS
PDVNESGLNFMPVGERIRFGLGAVRNVGADVVEAIVQAREEHGHFKDFSDYLDKVPTVAC
SKRVIESLIKAGAYDSLEHPRKGLMLIHEEAVDSVLATKKAADKGQFDLFAGLGDAGEEA
PNVFAVQVPDQRWDRKHELALEREMLGLYVSGHPLDGFQDALDAQTDTPLTTISEGELRH
GTEVVIGGIIAGVDRRVSKKDGSPWAIVTVEDYNGAQVELLVFSRLYGIVAPQIVEDNII
VAKAHISIKDDRTSLFGDDLKAAELGPGGGAGLPLRLTMRTDQCSLENIAKLKAVLANNK
GESDVYLNIVHGEESRLMILGEHLRVERSGSLMGDLKATMGPGILG
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacaatcctccttcgtacacctgcacaatcacaccgagtattcaatgctcgac
gggatggcgaaggtggacatgctcgcagaggaagtgtccaggcaggggatgccagcagtg
ggcatgacggaccacggcaacatgttcggtaccgacgccttctaccgcgccatgtgcgac
gctggggtcaagcccatcatcggcatcgaggcctatatggcgcccgaatcgcgattcaat
aaagagcgcattcgctggggtgagccgcaccaaaaaagtgacgacatttctgcatccggg
gcttacctgcaccaaaccatgctggcggaaaatgctgaaggcctccacaacctcttttat
ctttcctccatggcctcctatgagggccagcttggcaagtggccgcgcatggacgccgaa
ctcatcgccgagcacgcctccggcatcatcgccaccaccggctgcccctccggtgatgtg
caaacccgcctacgcttggggcaattcgacgccgcgcttgaagccgctgcaatgtggcag
gacatttatggcaaagacaattacttcctcgagctcatggatcacggactcgatattgag
cggcgtgtgcgcaacgagctgcttgaaatcggtcgcaaactggatctgccgccgctggtg
accaatgactgccactatgttctggaatcccaggccaaagcacacgaggcaatgttgtgc
gtgcaaaccggcaaaacactcaacgatccagaccgattcaagtttgacggcaccggctac
tacatcaaatccgccaagcagatgcgcgagatttgggacgacaccgtgccggacgggtgc
gacaacaccctgtggatcgccgagcgggtacaagactacggcgagatttgggaatcgcat
ccacacgatcgcatgcccatcgccgatgtgcccgaagggcatacaccaaccacctggcta
cgccacgaagttcttgaagggctcaaagagcgtttcgacggcggcgaggtgcccaaggag
tacatcgatcgcgctgattatgagatcgacgtgattgacatgaagggctatccctcgtac
ttcctgatcgtggccgagctgatcaagcacgcgcgctccatcggcatccgcgtgggaccc
ggccgtggatctgcagctggtgcgctggtggcgtatgcgctgacgatcaccaacattgat
cccatcgagcatggtctcctctttgagaggttcctcaatcccgagcgcccctctgctccc
gatattgatattgacttcgacgatcgtcgtcgcggtgaaatgatccgctacgcctcagac
cgatggggtgaggacaagatcgcccaggtgatcaccttcggcacggtgaaaactaagcag
gcgctgaaggactccgcccgcgtgcaatacggccagcccggctaccagattgcagacaag
atcaccaaggaactcccaccgccgattatggccaaagacatccctttgtctggcattaag
gatccgaatcatccgcgctatgccgaagctggcgaggtgcgcaaactcatcgagaccgac
cccgatgtgcagaagatctacgacactgcagtggggcttgaaggcgtaattcgccagcct
ggcgtgcacgcctgtgcggtgattatggcgagtgtgccgctgctggatcacatcccaatg
tggaagcgcgccgccgacggtgcgctgatcacgggctggccatacccagcctgcgaggct
atcggtttgctgaagatggacttcctgggccttcgaaacctcacggtgatcggcgatgcc
ttggaaaatatcaaggccaaccgtggcgaagagatcgacctggaggctttggaaaccgat
gatccaaaggtgtacgagctgctctccggtggccacaccttgggcgtgttccagctcgac
tccggcggtatgcaggaactgctcaagcgcatgcagcccaccggctttaatgacatcgtg
gcatcactggcgctgtatcgcccgggcccgatgggcgtgaacgcgcacaatgactacgcg
gatcgcaaaaacggccgcaagccgatcgagccaattcacccagagttggaggaggcactc
aaggacatcctggaggagacctacggcctgatcgtgtatcaggagcagatcatggagatc
tcccgcaagctcgccaattacaccgctggcgaggccgatggcttccgtaaggccatgggt
aagaagaagcccgaagtgctggctaaggaatacgccaagttctcacagggcatgttcgat
aacggtttttccaaggcggcggtggatgcgctgtggggcaccattgagcccttcgcctcc
tacgcgtttaacaagtcgcacgccgctggctatggcctggtgtcttattggacggcgtat
ttgaaggccaactacaccgctgaatacatggcggcacttttgacctcagtggccgataag
aagaacaagtcggcgctgtacttggcggactgccgacacttaggcatttcggtgctctca
ccggacgttaacgagtctggcttgaacttcatgcccgttggtgagcgcatccgtttcggc
ctcggagctgtgcgcaacgtgggcgcggacgtggtggaggccattgtgcaggcgcgcgag
gagcacggccacttcaaggatttctccgattacctggacaaggtgcccaccgtcgcgtgt
tccaagcgcgtgattgaatcgcttattaaagcaggggcctacgattccttggaacacccg
cgcaaggggctcatgctgattcacgaagaggccgtggactcggtgttggctactaagaaa
gcggcggataaggggcagtttgatctttttgcggggctcggcgacgcaggagaagaagcc
cctaacgtctttgccgtgcaagtgccggatcagcgttgggatcgaaaacacgagcttgcc
ctagagcgcgaaatgctcggcctgtacgtgtctggccaccccctggacggattccaagac
gcccttgacgcgcagacggatacgccgctgaccacgatttctgaaggggagctacgccac
ggcactgaggttgtgatcggcggcatcatcgccggtgtggatcgccgcgtgagcaagaag
gacggctccccctgggcgatcgttacagtggaggactacaacggcgcgcaggtggaactg
ctggtgtttagccgcctgtacgggattgtggctccgcagatcgtcgaagacaacatcatc
gttgccaaggcgcacatctccatcaaggatgaccgcacctcgttgttcggcgacgatctc
aaggccgccgagcttggaccaggtggaggtgctgggttgccgctgcgcctgaccatgcgt
accgatcagtgctcgttggaaaacattgccaagctcaaagcggtgttggcgaataacaaa
ggcgagtctgatgtgtatctcaacatcgtccacggcgaggaatcgcgcctgatgatcctc
ggcgagcacttgcgcgtcgagcgctcgggcagcctcatgggtgacctcaaagccaccatg
ggtcctggcattttgggttag
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