Corynebacterium geronticis: CGERO_07810
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Entry
CGERO_07810 CDS
T06788
Symbol
lysA2
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
cgk
Corynebacterium geronticis
Pathway
cgk00300
Lysine biosynthesis
cgk00470
D-Amino acid metabolism
cgk01100
Metabolic pathways
cgk01110
Biosynthesis of secondary metabolites
cgk01120
Microbial metabolism in diverse environments
cgk01230
Biosynthesis of amino acids
Module
cgk_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cgk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CGERO_07810 (lysA2)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CGERO_07810 (lysA2)
Enzymes [BR:
cgk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CGERO_07810 (lysA2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NAD_binding_9
Orn_Arg_deC_N
DUF4129
Motif
Other DBs
NCBI-ProteinID:
AZA11861
UniProt:
A0A3G6J1F7
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All DBs
Position
complement(1655822..1658551)
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AA seq
909 aa
AA seq
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MKLAIIGGGPRALFAVEELVSATEKLNGQARIDVTVFEPETPGAGWVYRQDQPACWRLNA
PAAMVRTSLGSAQEFLGSAEPFPPRREVGRFLAASWDALVAELPEHLSVQVESTRVAELA
RSGDQWVINGQCFEEVLLATGHQHAWAGQLDANHPYFDGLDAVAPGAEISVRGAALTFID
VCLALSEGRGGRFEGEGLLRYVAGGEEPARIQPVSRSGRFMEVKPNPGAALAGVVLDNAE
EFEARIAWAQDVEDLRRVLIDAARSLLHTAEEQTLRAVLDGTDFSGDATAELRTSCEVAL
GLREPGAPWALGHAWRTLYQALIRRVSYGAPIPGFADLARTMERVAFGPPPVTATRLLAL
IDAGIVAAPIPEEAKGADVDAVIAPAGVLPGSLAAHCIEHGWLGRLKDGRLDLGRAGQSM
EQPTLAVIGRDAEGMVLGHDTLNRELHPELRNWANAVVARAFDRKMTATVPLEARLEPWM
LQLAADPQRCAEIVDTFGSPTNVVQPGVLDRNAQGLIRAGQQRGVEVRVFFARKANKALG
FVDAARDHGHGIDVASERELQQVLDRGVPGERIILSAAIKPDRLLRLAIANSVCISADSR
AEARRIEHLAQGQPVRIAPRIAPDPSVLPATRFGELASQWVEEIERGFAPNVHFAGVHVH
LHGYAERDRRKALAFAFQVIDAAPGQPEFIDIGGGIPMSYLERPEQWRVFHERLRTPDFT
WKGDPLANVYPFFQRPVRGEWLAQLFDAPVPGFGRTSDEFRARNLRLHAEPGRSLLDGGG
MILARVAFVKQRSDGLPLVGLEMNRTQCRTTSDDILLDPLLVPAAEGPREHEGIEAFLVG
AYCIEDEVIIRRAMRFPKGVVPGDVIAIPNTAGYFMHILESASHQIPLAKNVVFEPRTAA
VHLDAIDED
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgaaattggccatcatcggcggcggtccacgcgcgctattcgctgtagaggaactggtg
agcgccaccgagaagctcaacggccaggcccgaatcgatgtcaccgtattcgagcccgag
accccgggtgctggctgggtgtatcgccaagaccaacccgcgtgttggcggctcaacgcg
cccgccgcgatggtgcgcacctcgctgggcagcgctcaggagttcctgggcagcgctgag
ccgttcccgcctcgccgcgaagtgggccgatttctcgccgcatcatgggatgcgttggtc
gccgagctgcccgagcacctcagcgtgcaggtggagtccacgcgagtagcagaactggcg
cgaagcggcgatcaatgggtgatcaacggccaatgttttgaagaggtgctgctcgccact
gggcatcagcacgcttgggcgggacagcttgacgccaaccatccctatttcgacggcctc
gacgctgtggcaccgggcgccgagatctcggtgcgtggggcagcgctgacgttcattgac
gtgtgcctcgcgttaagcgaggggcgcggcgggcgctttgaaggcgagggactgctgcgt
tacgtcgctggcggcgaggagcctgcccgcattcaacctgtgagccgttccggacgcttc
atggaggtcaagcccaatcctggtgctgcgctcgccggggtggttttggacaatgcggag
gaatttgaggcgcggatcgcgtgggctcaagatgtagaggatctgcgtcgcgttctcatc
gacgccgcccgatcacttctgcacacagcagaagagcagacactgcgcgcggtgctcgac
ggcaccgacttctctggcgatgccaccgctgagctacgcacctcctgtgaggtggcgctt
ggtctgcgcgaacccggggcgccctgggccctggggcacgcctggcgcaccctgtaccag
gcgttgatccggcgtgtgagctacggggcacccatccccggttttgcagacctggctcgc
acgatggagcgcgtggcgtttgggccgcctcccgtgaccgccacacgcctgctggcgctc
attgacgcaggcatcgtcgccgcgccaattcctgaagaggcgaagggcgcggacgtggac
gcggtaatcgccccggcaggcgtgctgcccggcagcctggcggcgcattgcatcgagcac
ggctggctcggacgcctgaaggacggtcgccttgacctaggacgcgccgggcagtcgatg
gagcaaccaactttggcggtgattggccgtgatgctgagggcatggtcttaggccatgac
acgctgaatcgtgagctgcatccggagcttcgcaactgggccaacgccgtggtggcgcgg
gcttttgatcgcaagatgacagccaccgtgccgcttgaagcgcgccttgagccgtggatg
ctccagctcgccgccgatccgcagcgttgcgctgagatcgtagacacctttggttcgccc
accaatgtggtgcagccgggtgtgctcgatcgcaatgcccagggattgatccgcgcgggc
cagcagcgcggggtggaggtgcgcgtcttttttgcgcgcaaggcgaataaggcgctcggt
tttgtggacgccgcacgcgatcatgggcatggcatcgatgtagccagcgagcgcgagctg
cagcaggtgctggatcgtggggtgccaggtgagcgcatcatcctctcggccgcgatcaag
ccggatcggctgttgcgcctcgctatcgcgaatagcgtctgtatttctgcggattcgcgt
gctgaggcgcgccgcatcgaacaccttgcgcaggggcagccggtgcgcatcgcgccgcgt
atcgccccggacccgagcgtgctccccgctacccgcttcggggaattggcctcgcagtgg
gtcgaagagatcgagcgtggttttgcgcccaatgtgcatttcgccggtgtgcatgtgcat
ttgcatgggtatgcggagcgggatcgtcgaaaagcgttggcgtttgcattccaggtgatc
gacgccgcgcccgggcagccggaatttatcgacatcggcggcggcatccccatgagctac
ctggagcgccccgagcagtggcgcgttttccacgagcgcctgcgcacccccgatttcacc
tggaaaggcgacccgctggcgaatgtctatccctttttccagcgcccggtgcgcggggag
tggctcgcccagcttttcgacgcccccgtgcccggcttcgggcgcaccagcgatgagttc
cgcgcccgcaacctacgccttcacgccgaacctggccgaagtctgctcgacggcggaggc
atgatcctggcgcgcgtggcgtttgtgaagcagcgcagcgacggcctgccgcttgtgggg
ttggaaatgaaccgcacccaatgccgaaccaccagcgacgatatcctcctggacccgctg
ctcgtccccgctgccgaagggccccgcgagcacgaggggatcgaggcattcctcgtgggg
gcctactgcattgaagatgaggtcatcattcgccgcgccatgcgtttcccgaagggggtg
gtgccgggcgacgtcatcgcgatcccgaacacggcaggctacttcatgcacatactggaa
agcgcttcgcaccaaatcccgctggcaaaaaacgtggtgtttgagccgcgcacggccgcg
gtgcacctcgatgccatcgacgaagattga
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