Corynebacterium glutamicum ATCC 13032 (Kyowa Hakko): Cgl1156
Help
Entry
Cgl1156 CDS
T00102
Symbol
Cgl1156
Name
(GenBank) Superfamily II DNA and RNA helicases
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cgl
Corynebacterium glutamicum ATCC 13032 (Kyowa Hakko)
Pathway
cgl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cgl1156 (Cgl1156)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgl03019
]
Cgl1156 (Cgl1156)
03009 Ribosome biogenesis [BR:
cgl03009
]
Cgl1156 (Cgl1156)
Enzymes [BR:
cgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Cgl1156 (Cgl1156)
Messenger RNA biogenesis [BR:
cgl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Cgl1156 (Cgl1156)
Ribosome biogenesis [BR:
cgl03009
]
Prokaryotic type
rRNA helicases
Cgl1156 (Cgl1156)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
UvrA_inter
CMS1
adh_short
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BAB98549
UniProt:
Q8NR96
LinkDB
All DBs
Position
1209934..1212132
Genome browser
AA seq
732 aa
AA seq
DB search
MSNTENVNGDVEQPNNVISSESQETPQGDSASADFALETPTNTVEDAPASEGSEEITRVA
DTSEDADSADADNASNVINENEDSSEGANQPSNESSSTEAKSGFDALGLPERVLDAVRKV
GYETPSPIQAQTIPILMEGQDVVGLAQTGTGKTAAFALPILARIDKSVRSPQALVLAPTR
ELALQVADSFQSFADHVGGLNVLPIYGGQAYGIQLSGLRRGAHIVVGTPGRIIDHLEKGS
LDISGLRFLVLDEADEMLNMGFQEDVERILEDTPDEKQVALFSATMPNGIRRLSKQYLNN
PAEITVKSETRTNTNITQRFLNVAHRNKMDALTRILEVTEFEAMIMFVRTKHETEEVAEK
LRARGFSAAAINGDIAQAQRERTVDQLKDGRLDILVATDVAARGLDVERISHVLNFDIPN
DTESYVHRIGRTGRAGRTGEAILFVTPRERRMLRSIERATNAPLHEMELPTVDQVNDFRK
VKFADSITKSLEDKQMDLFRTLVKEYSQANDVPLEDIAAALATQAQSGDFLLKELPPERR
ERNDRRRDRDFDDRGGRGRDRDRGDRGDRGSRFDRDDENLATYRLAVGKRQHIRPGAIVG
ALANEGGLNSKDFGRITIAADHTLVELPKDLPQSVLDNLRDTRISGQLINIERDSGGRPP
RRFERDDRGGRGGFRGDRDDRGGRGRDRDDRGSRGGFRGGRDRDDRGGRGGFRGRDDRGD
RGGRGGYRGGRD
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataccgagaacgtcaacggcgacgtagaacagccgaataacgtcatttcgtcg
gaatctcaggaaaccccgcagggtgactcagcatcagctgacttcgctctcgaaacccca
accaacactgttgaagatgcaccagcatctgagggtagcgaagagatcaccagggttgcg
gatacttctgaggacgccgactctgcagatgcagacaacgcgagcaatgtaatcaatgag
aatgaggactcctcggaaggtgctaaccagccttcaaacgagtcatcctctacggaagcc
aaatccggcttcgatgcactcggactgccagagcgtgttcttgacgctgtgcgcaaggtg
ggttacgaaactccttccccaattcaggcacaaaccatcccaatcctcatggagggccag
gatgttgttggtctagcacagaccggtaccggtaagactgcagctttcgcgctgccaatc
cttgcccgtattgacaagtccgtgcgcagcccacaggcacttgtgcttgcccctacccgt
gagctggcacttcaggttgctgactccttccaatccttcgctgaccacgtcggtggcctg
aacgttctgccaatctatggtggacaggcttacggcattcagctctctggcctgcgtcgt
ggcgctcacatcgtcgtgggtaccccaggccgaatcatcgatcacctcgaaaagggctcc
ctggatatctccggactgcgcttcctcgtgctcgatgaagcagacgagatgctgaacatg
ggcttccaggaagatgtcgagcgcatcctcgaggacaccccagacgagaagcaggttgca
ctattctccgcaacgatgccaaacggcattcgtcgcctgtccaagcagtacctgaacaac
cctgctgaaatcaccgttaagtccgagaccaggactaacaccaacatcacccagcgcttc
ctcaacgttgcacaccgcaacaagatggatgcactgacccgtattctcgaggtcaccgag
tttgaagcaatgatcatgttcgtgcgcaccaagcacgaaactgaagaagttgctgaaaag
ctccgtgcacgcggattctccgcagcagccatcaacggcgacattgctcaggcacagcgt
gagcgcaccgtcgaccagctgaaggacggccgcctggacatcctcgttgcaaccgacgtt
gcagcccgtggtcttgacgttgagcgcatctcccacgtgcttaacttcgacattccaaac
gacaccgagtcctacgttcaccgcatcggccgcaccggccgtgcaggacgtaccggcgag
gcaatcctgttcgtgaccccacgtgagcgtcgtatgcttcgctccatcgagcgcgcaacc
aacgcaccactgcacgaaatggaactgccaaccgtcgatcaggtcaacgacttccgcaag
gtcaagttcgctgactccatcaccaagtccctcgaggacaagcagatggacctgttccgc
accctggtcaaggaatactcccaggccaacgacgttcctctagaggacatcgcagcggca
ctggcaacccaggcacagtccggcgacttcctgctcaaggagctcccaccagagcgccgt
gagcgcaacgaccgccgtcgtgaccgtgacttcgacgaccgtggtggacgtggacgcgac
cgtgaccgtggcgaccgcggagatcgtggctcacgcttcgaccgcgacgacgagaacctg
gcaacctaccgcctcgcagtgggcaagcgccagcacatccgcccaggcgcaatcgttggt
gcacttgccaacgaaggtggcctgaactccaaggacttcggccgcatcaccatcgcagcc
gaccacaccctggttgaactgccaaaggatctcccacagagcgttcttgacaacctgcgc
gacacccgcatctccggccagctcatcaacatagaacgcgactccggtggacgcccacca
cgccgcttcgagcgcgatgaccgtggcggacgcggcggattccgcggcgaccgtgatgac
cgcggtggacgtggacgtgaccgtgacgatcgtggaagccgtggaggtttccgcggtgga
cgtgaccgtgatgatcgtggcggacgcggtggattccgcggacgcgacgaccgcggagac
cgtggtggccgtggcggttaccgtggcggacgcgactaa
DBGET
integrated database retrieval system
