Chryseobacterium gleum: NCTC11432_00412
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Entry
NCTC11432_00412 CDS
T07042
Symbol
dnaE_1
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cgle
Chryseobacterium gleum
Pathway
cgle03030
DNA replication
cgle03430
Mismatch repair
cgle03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cgle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC11432_00412 (dnaE_1)
03430 Mismatch repair
NCTC11432_00412 (dnaE_1)
03440 Homologous recombination
NCTC11432_00412 (dnaE_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgle03032
]
NCTC11432_00412 (dnaE_1)
03400 DNA repair and recombination proteins [BR:
cgle03400
]
NCTC11432_00412 (dnaE_1)
Enzymes [BR:
cgle01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC11432_00412 (dnaE_1)
DNA replication proteins [BR:
cgle03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC11432_00412 (dnaE_1)
DNA repair and recombination proteins [BR:
cgle03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC11432_00412 (dnaE_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
Phytochelatin
Motif
Other DBs
NCBI-ProteinID:
VEE04838
UniProt:
A0A448AX40
LinkDB
All DBs
Position
1:437355..440405
Genome browser
AA seq
1016 aa
AA seq
DB search
MYLNCHSYHSLRYGTLSIDDLVSQASALGINELVLTDINTITGVYEFKKKCESQGIKPVA
GIEVRKGSKLLYIAIAKEFAGLGEVNKMLTEYNCDGTELPERPNLDHNFIIYSLQNNPEG
LKENEYIGIRQEELNLLIRSEYRNLISKMVILQPVTFGTKKEYNLHRILRAIDNNTLLSL
LPENEICHKSEYFKSPQSLLDEFKYYPQIIENTKRLLSQCSFDFAFSTPRNKKHYTGTKA
DDLKLLTRLAYAGLEKRYGRKNEQAKLRVEKELKVIDELDFSGYFLITWDIIQYSNSMGF
MHVGRGSGANSIVAYCIGITDICPLELDLYFERFLNLNRKSPPDFDIDWSWQKRDIILDY
IFNRYGKDYVAFCGTNVEFKYRSIIREVGKAFGLPKEELDELSKNPESVFRDEIVQKVQK
YGKLLEKFPNQRSMHACGILISEEPLTNFTALEMPPKGFPIVQWDMYMAEELGFEKLDIL
SQRGLGTIKDTVRLIEEKRGIKVDIKDTALSKDEKICNEFLSQGRTIGCFYIESPAMRGL
LRRLKCDNYKVLVAASSIIRPGVAQSGMMREYIFRHNNPNQFEYFHKVFEEELGETYGIM
VYQEDVIKIALHFGGLSAADGDILRRAMSGKYRSLEDLQKVKNHFFESCRELGHSEELSR
EVYRQIESFAGYSFCKAHSASYAVESYQSLYLKVYYPLEFMVSAINNMGGFYRTEVYVHE
AKMSGGKILNPCVNKSEYETTIYGDNIYLGLMLLEKVESKIAQLIPEERRKSGDYLSMED
FIKRIPVGIETLQILIFIGAFRFTGIPKNELLLKARVLLGEFKPEHRLQTLFDTPVKDFK
LPELKRNVFEDAFDEIEILSFPVSCTPFDLLQTKYKGQIMASDLVKYHKREVKMLAYLIA
RKHVPTKRGTMFFGTWIDVEGNYFDTAHFPDCLEKYPFQGGGCYLLLGTVEVDFHFPTIT
VTKMAKMPFIPDPRYSHDEDKRYETQEKIKEDVSMTFRAPYPQDHEIRLPRKSNIK
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgaattgtcattcatatcatagtttaagatatggaacactatctatagatgac
cttgtttctcaagcatcagcattgggaatcaatgagcttgtacttacagatatcaacaca
attaccggggtgtatgaattcaaaaagaaatgcgaatcacaaggaattaaaccagtagca
ggcatagaagtcagaaaagggagtaagcttttatatattgccattgcaaaagaatttgcc
ggtttaggagaagtaaacaagatgctgaccgaatataactgtgatggcaccgagttaccg
gaaagaccaaatctggatcataactttatcatttattctttacaaaataatccggaaggg
ctaaaggaaaatgaatatataggaataagacaggaggaattaaatctactgatccggtca
gaatacaggaatctcatttcaaaaatggtaatcctgcagccggtaacttttggaacaaaa
aaagaatacaatttacatcgcatcttaagggccattgacaataatactttgttgtcgcta
ttgccagagaatgaaatctgtcataaatcagagtattttaaatctccacaatctttactg
gatgaatttaagtactatcctcaaataattgaaaatactaaaaggcttctgtctcaatgt
agctttgattttgcgttttctacccctcgaaataaaaagcattacaccggtacaaaagca
gatgatttaaaactgttaacccgtttagcctatgccggtttagaaaaaagatatggaagg
aaaaatgagcaggctaagttgcgggttgaaaaagaattgaaggtcatcgatgaacttgat
ttcagtggttactttcttataacctgggatattatccaatacagtaatagtatgggattt
atgcatgttggccgtggtagtggagcaaacagtattgtagcctattgtattggaattaca
gacatatgcccattagaactcgatttatattttgagaggtttcttaatttaaacaggaaa
agtccaccagattttgatattgattggagctggcagaaacgggatattatattggattac
atttttaaccgatatggaaaagactacgtagcattctgcgggacaaatgttgagttcaaa
taccgttcgattatacgggaagttggaaaagcgttcggattaccgaaagaagagttggac
gaactgagtaaaaatcctgaaagcgttttcagagacgaaatcgtacagaaagttcaaaaa
tacggaaaactgctggagaaatttcccaaccagcgaagtatgcacgcttgtggtatttta
atttctgaggaaccattaacaaacttcaccgcactggaaatgcctcctaaaggatttccg
attgtacaatgggatatgtatatggcagaagaacttggatttgaaaagctcgatattctt
tcacagcgtgggctcggtaccattaaggacacagttaggctcattgaagaaaaacggggt
attaaagtagatattaaggatactgcactttcaaaggatgaaaagatctgtaatgagttt
ttaagccagggccggaccattggctgcttctatattgagtcaccggcaatgcggggactg
ctgagaaggctgaagtgtgataattacaaagtactggtagcggcatcatcaattatacgt
cctggagtggcgcaatccggaatgatgagggaatatattttcaggcataacaatccgaat
caatttgagtattttcataaagtatttgaagaggaactgggagaaacatacgggataatg
gtttaccaggaagatgtaataaaaattgctttacatttcggaggattgtctgctgcagat
ggagacattctcagaagagctatgagtggtaagtacagatcactggaagacttacagaaa
gtaaaaaatcatttcttcgaatcatgtagagaactgggccattctgaagaattaagcagg
gaagtttacaggcagatagaatcttttgccggatattctttctgtaaagcgcattctgca
tcatatgctgttgaaagctaccaaagtctttatcttaaagtttattatcctttggagttc
atggtttcagccatcaataatatgggaggcttttacaggactgaagtatatgtgcatgag
gctaaaatgtccgggggaaaaatacttaatccatgtgttaataaaagtgaatatgaaaca
acgatttatggtgataatatttatttgggattaatgcttctggaaaaagttgaatctaaa
atagcccaattgattccggaagaaagaaggaaatctggggattatttgtcaatggaagat
ttcattaaaagaattcctgtaggtattgaaacactccagatcttaatatttatcggagcc
tttagatttacgggaatacccaaaaatgagctgttgttaaaagccagagtattactaggt
gaatttaaaccagagcaccggttgcagacattgtttgatacacctgtaaaggattttaag
cttccggaactgaaacgaaatgtctttgaagatgcttttgatgaaatcgaaatactgagt
ttcccggtttcctgtactcctttcgaccttttacagacaaaatataaagggcagataatg
gctagtgatctggtaaaataccataaaagggaggttaagatgttggcatatctgatcgca
aggaaacatgtgcctaccaaaagaggaaccatgttttttggaacctggatagatgttgaa
ggaaactattttgatacggcgcactttccggactgcctggaaaaatacccatttcagggt
gggggatgctatctgctcctgggaaccgtggaggttgattttcattttcctaccattact
gtcacaaaaatggcaaaaatgccattcatacccgatcccagatattcgcatgatgaagat
aaacgatatgagactcaggaaaaaataaaagaagatgttagcatgacttttcgcgcaccg
tatccgcaggatcatgagatcagactgccgagaaaaagtaatatcaaataa
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