Chryseobacterium gleum: NCTC11432_01232
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Entry
NCTC11432_01232 CDS
T07042
Symbol
pcrA_1
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cgle
Chryseobacterium gleum
Pathway
cgle03420
Nucleotide excision repair
cgle03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC11432_01232 (pcrA_1)
03430 Mismatch repair
NCTC11432_01232 (pcrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgle03400
]
NCTC11432_01232 (pcrA_1)
Enzymes [BR:
cgle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC11432_01232 (pcrA_1)
DNA repair and recombination proteins [BR:
cgle03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC11432_01232 (pcrA_1)
MMR (mismatch excision repair)
Other MMR factors
NCTC11432_01232 (pcrA_1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
Viral_helicase1
UvrD_C_2
AAA_11
AAA_30
Motif
Other DBs
NCBI-ProteinID:
VEE05647
UniProt:
A0A3S4QV00
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All DBs
Position
1:1324427..1326112
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AA seq
561 aa
AA seq
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MPVEISSDSLIEINKHFKVKAGPGAGKTHWLVEHIKNVTRNSTLISGAKKILCITYTNIA
AETVLTRLGSSATQVEVLTIHSFFYSHIIKPYLSFIAEEYDFDVSSLDGHTDIIVSDYSF
LQEWKALTGQKRITDDNLITYAFERLRWLLVDDELIVRTDYPFRFGGYPIKNSSYFDYKK
MTWQRGILHHDDVLFFAYQIIKKFPFVIKIINKKFPYVFIDEFQDSNPIQVNIIEKLSTG
STIGIIGDVAQSIYAFQGATPALFDGFTLPEMEHYFLKFNRRSTNEIIDFLNIIRQDLPQ
DYHRTVSISKPVLYVGDMVEALRRAKTSCPDGYVYTLSRNNITSNAMKSEINGSGMDDKL
LRKIKLEDSTKKRADLITACITAVALGQQSKFKEAIKVLENVINYRRNRLEGKKKALHYL
TILMAKFNDYKDLSMLEFSEFIRLNINDSIPKATKGKGKIFYENNTFQSVYLCVNISEDL
SYHRTVHKAKGDEFDNVLLILKEEKDLKFMYEPDLYNYTQEEHRIYYVGASRAKDQLFIS
VPTLDVNVEDIIKDMVNIQRF
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgccagtagaaatatcatcagattccttaatagagattaataaacattttaaagttaag
gctggacctggtgctggtaaaacgcactggctggttgagcacattaaaaatgttacaaga
aattccacactaatttccggcgcaaagaagattctttgcattacatataccaatattgca
gctgaaacagttttaacaaggcttggaagctcggcaactcaggttgaagtattgacaatt
cacagtttcttttattcccatataattaaaccttatctatcattcattgctgaagaatat
gattttgatgtcagctcgctagatggtcatacagatattatagtttctgattactcattt
ttgcaggagtggaaggcattaaccggtcaaaaaagaattaccgatgataatttaattact
tacgcctttgaaagactcagatggttactagtagacgatgaattgattgtcagaacagat
tatcctttcagatttgggggttatcctattaaaaacagctcatattttgattacaaaaaa
atgacttggcaaaggggtatacttcatcatgatgatgtattgttttttgcctatcagatt
atcaaaaagtttccttttgttattaaaataatcaataagaagttcccttacgtatttatt
gatgaatttcaggatagcaaccctatacaggtaaacataatcgaaaagttatcaactggt
tctacaattggaatcatcggtgatgtagcgcaatccatatatgcatttcaaggtgcaaca
cctgcacttttcgatgggtttacattacctgaaatggagcattattttttaaaatttaat
cgcagaagcactaatgaaatcattgatttcctaaatattatcaggcaagatcttcctcaa
gattatcatagaacggtttctatatcaaaaccagtactttacgtgggtgatatggtcgaa
gctctgagaagagctaaaacctcttgtcctgatgggtatgtatatacattatctagaaat
aatatcacttccaatgctatgaaatcagaaataaacggctctggaatggacgataagctt
ttacggaaaatcaagttagaagactcgactaaaaaaagggctgatctaataacagcgtgt
attactgctgttgctctcgggcaacaatctaaatttaaagaagccataaaagttttagaa
aacgtaataaattatagacgtaataggttagaaggaaaaaagaaagctttacattactta
acgatcttaatggcaaaattcaatgactataaagatctttctatgcttgaattctcagaa
tttatcagactgaatattaacgatagtattccaaaagcaacaaaaggaaaaggaaagatt
ttttatgaaaacaacacattccaaagcgtctacttgtgtgtaaatatatctgaagattta
agctatcacagaacagtccataaggcaaaaggagatgaatttgataacgttctattaatt
ttaaaagaagaaaaagatttaaaatttatgtatgaaccagatttatacaattatacgcag
gaagaacatagaatttattatgttggagcaagtcgtgctaaagatcaactttttatttca
gttccaacacttgatgttaatgttgaagacatcataaaagatatggtaaatattcaaaga
ttttaa
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