Chryseobacterium gleum: NCTC11432_02363
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Entry
NCTC11432_02363 CDS
T07042
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
cgle
Chryseobacterium gleum
Pathway
cgle02020
Two-component system
cgle02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cgle00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NCTC11432_02363
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NCTC11432_02363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgle03021
]
NCTC11432_02363
Transcription machinery [BR:
cgle03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NCTC11432_02363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
LacI
Motif
Other DBs
NCBI-ProteinID:
VEE07862
UniProt:
A0A448B2G7
LinkDB
All DBs
Position
1:complement(2502967..2504430)
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AA seq
487 aa
AA seq
DB search
MLKQHLQLKLGQKLAPQQIQLMKLIQLHTLEFEEELERELEENPALEIAKEDSKEDDYSS
LEDAYQDEGTESIETDFDVNEYIYDDEPSYKTASSNYSPDDEEFDNESLLTEGQSLYDYL
TEQIHLVNISDEDLKIAEYLIGNLDTDGYLRREIKSIVDDLAFSQGIYTTKERVEDILEN
YVQKLDPPGVGARGLQECLLLQIEKKVSSDKAVSLAANILRHQFEALTNKHYNKIIQKYD
IEEDDLKDALDEISKLSPKVGGNFDTQTITINQEIIPDFVIQVKDGQVIPMLNSKNAPTL
RVSEEYKDILTTYSHDKNSSEHKQAALFIKQKLDAAKWYIDAINQRQNTLLQTITAIVKF
QKDYFITGDEKSLKPMILKDVADITGFDISTISRVVKSKYADTPNGIVYLKDLFSDSLTN
DDGEEVSTKEIKTHLQEVIDKENKRKPLTDDALVVILKEQGYNIARRTIAKYREQLNIPV
ARLRKEL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaacaacacttacaactcaaattaggacagaagctggcccctcagcagatccag
ttgatgaagcttattcagcttcatactcttgaatttgaagaggagttggaaagagagtta
gaagaaaacccagctttggaaattgcgaaagaagattctaaggaagacgattattcttcc
cttgaagacgcttatcaggatgagggtacagaaagcattgaaacagatttcgacgtcaat
gaatatatttatgacgacgaaccaagctataaaaccgcatccagcaactactctccggat
gatgaagaatttgataacgagagtcttttaacagaaggacagtccttatatgattatctt
acagaacagattcacctggtgaatatcagtgatgaagatctgaagattgcagaatatctt
atcgggaatttagatacggacggctatctgagaagagagatcaaatctattgttgatgat
ctggctttctcacagggaatttacactactaaagaaagagtggaggatatcctggaaaat
tatgttcagaaacttgatccgccaggagtgggagcaagaggactgcaggagtgcctgtta
ttacagattgaaaagaaagtcagctcagataaagcagtttctttggctgccaacatcctg
agacatcagtttgaagctttgacgaataagcattataacaaaatcatccagaaatacgat
attgaagaagatgatctgaaagatgctctggatgaaatatcaaagctatccccaaaagta
ggaggtaactttgatacacagacaattacgatcaatcaggaaattatcccggattttgtt
attcaggtgaaagacggtcaggtaattcctatgctgaacagcaagaatgcacctacatta
agagtttctgaagaatacaaagacattcttaccacatattcccatgataaaaactcatcg
gaacacaagcaggctgctttatttatcaagcaaaagctggatgctgcaaaatggtatatc
gatgccattaaccagcgtcagaatacattgttgcagacgattacagccattgtgaaattc
cagaaggattatttcatcaccggagacgaaaaatctctgaaaccaatgatcttgaaggat
gttgctgatattacaggatttgatatctctacgatttcaagggtagtaaaaagtaaatat
gcagatacacctaacggtattgtatatcttaaagatctgttctcagacagcttaacgaat
gatgatggggaagaagtttccaccaaggaaatcaaaactcatcttcaggaagtgattgat
aaagaaaataagagaaaaccgcttaccgatgatgcattagtggttattctgaaagaacag
ggatataatatagcaagaagaacgattgcaaagtatcgtgaacagcttaatattccggta
gcaaggttaagaaaagaactttaa
DBGET
integrated database retrieval system