Chryseobacterium gleum: NCTC11432_02947
Help
Entry
NCTC11432_02947 CDS
T07042
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cgle
Chryseobacterium gleum
Brite
KEGG Orthology (KO) [BR:
cgle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgle03032
]
NCTC11432_02947 (topA)
03400 DNA repair and recombination proteins [BR:
cgle03400
]
NCTC11432_02947 (topA)
Enzymes [BR:
cgle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NCTC11432_02947 (topA)
DNA replication proteins [BR:
cgle03032
]
Prokaryotic type
DNA Topoisomerases
NCTC11432_02947 (topA)
DNA repair and recombination proteins [BR:
cgle03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC11432_02947 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
VEE08950
UniProt:
A0A448B4D1
LinkDB
All DBs
Position
1:complement(3125461..3128022)
Genome browser
AA seq
853 aa
AA seq
DB search
MSKNLVIVESPAKAKTIQKYLGKDFEVKSSFGHIRDLPKKGMGIDLATFNPDYEVSADKK
KLVTELKAAVKKADMVWLASDEDREGEAIAWHLADELKLKPENRKRIVFHEITKNAILKA
IDNPRDIDQNLVNAQQARRVLDRIVGFEMSPVLWKKVKPGLSAGRVQSVAVRLIVEREKE
IREFIPKASFKLDGIFLNKTEQEIAAKLKKDFEKEEDAEKFLEQAKTTQFKVLNVETKPG
TRSASAPFTTSTLQQEASSRLGYNVTNTMRLAQRLYEEGYITYMRTDSVNLSQEAIEGAK
KQIISEYGAEYSSPRNYTTKSASAQEAHEAIRPTDFGVKSIGDAQLNKLYQLIYRRTLAS
QMANAKIEKTVIEIGNTSLPHHFEAQGEVIIFDGFLKAYGIVKTEDDDEENNDKLLPKVS
VGEVLSYKTITATEKFTRPSARYTEAGLVRKLEELGIGRPSTYAPTIQTIQNREYVDKRE
IEPQTREVIKMSLVKDKIKKVVLEEKFGGDKNKFVPTDIGEVVNDFLTDNFREILDYGFT
ARVEESFDEIASGDQKWKEMMTNFYSKFHPRIEDVEENADRATGDRLLGVDPKTGKNVHA
RIGRFGAMIQIGETDDEEKPIFASLMTGQNIATITFEEALELFKLPFDLNAVDGQPVSVG
VGRFGPYVKWGETYISIPKGEDPLSVDQKRAEEIISEKKIADAPIATYKGEPVTKGSGRF
GPFIKYKDIFVNVPKRYDFENLSQSDINELIDAKLEKEANRYIQQWEKEKISIENGRWGP
FIKFGKAMFKIPKKADDTKYEAEELKELSLDEVKKWITDQDPKAFAEKKKPAAKKATTTK
KTTAAKKPAAKKK
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaatttagtaatcgtagagtccccggcaaaggcaaaaactattcagaaatat
ttaggtaaggatttcgaagtgaaatccagtttcggtcatatccgtgatctgcctaaaaaa
ggaatgggaatagatcttgccacctttaatcctgattacgaagtttcagcagacaagaag
aaattagtgacagaattaaaagctgcagtaaagaaagctgatatggtttggctggcttcc
gatgaggaccgcgagggagaagctattgcctggcacttggcagatgagctgaagctgaag
cctgaaaacagaaaaagaattgttttccacgagattactaaaaatgccattctaaaagca
attgacaatccgagagatattgatcagaacctggtaaatgcacagcaggcaagacgtgtg
ctggacagaatcgtaggttttgaaatgtcgcccgttttatggaaaaaagtaaaaccgggt
ttgtctgcaggtagagtacaatctgtagccgtaagattaatcgttgaaagagaaaaggaa
atccgtgagttcataccgaaagcgagctttaagcttgatggtatatttttaaataaaaca
gagcaggaaattgctgccaagctgaagaaagattttgaaaaagaagaagatgcagaaaaa
ttcctggagcaggcaaaaactacacaatttaaagttctgaatgttgaaaccaaaccaggt
acccgttcggcttcagcaccttttacaacctctacattacagcaggaagcttcttcaaga
cttggttataacgtaaccaacaccatgcgtctagcacagagactgtatgaagaagggtat
attacctatatgagaacagactccgtgaacctttctcaggaagctattgaaggagcaaaa
aaacaaatcatctcagaatacggagcagaatattcttcaccaagaaactatactacaaaa
tctgcttcagcacaggaagcgcacgaggccatccgtcctacagattttggagtaaaaagt
ataggagatgcacaactgaataaattgtatcagttaatatacagaagaacacttgcttct
cagatggctaatgctaaaatcgaaaagactgtaattgaaattggaaatacatctttgcca
catcattttgaagcgcagggagaagtgatcatatttgacggtttcctgaaagcatacgga
attgtgaagactgaagatgatgatgaagaaaacaacgataaattgctgccgaaagtaagc
gtaggagaagtattaagttacaaaaccattactgctactgaaaagttcacaagaccaagt
gcaagatatactgaagccggattggtaagaaaacttgaagaattagggatcggtagacct
tctacctatgcacctactattcagactatccagaacagagagtatgtggataaaagagaa
attgagccacagacccgcgaagtgatcaaaatgtctttggtaaaagacaaaatcaaaaaa
gtagttcttgaggaaaaattcggaggcgataaaaataaattcgttcctacagatatcggt
gaagttgttaatgacttccttacagataacttcagggaaattcttgattacggtttcaca
gcaagagttgaagaaagctttgacgaaattgcaagcggtgatcagaagtggaaagaaatg
atgacgaatttctattcaaaattccacccgagaattgaagatgtagaagaaaatgcagac
cgtgcaacaggagaccggcttttaggagtagatccgaagaccggtaaaaatgtacatgca
agaataggaagattcggagcaatgatccagatcggagaaacggatgatgaggaaaaaccg
atcttcgcatccttaatgacaggtcagaatattgcaaccattacttttgaagaagctctg
gaactgtttaaattacctttcgatttaaatgcagttgacggacagccggtttctgtggga
gtaggtagatttggaccttatgtcaaatggggagaaacatatatcagtattcctaaaggt
gaagatccgctttctgtagatcagaagcgcgctgaggaaattatcagtgaaaagaaaatt
gctgatgctcctattgcaacctataaaggagagccggtaacaaaaggatcaggaagattc
ggaccatttatcaaatacaaagatatctttgtaaatgttccaaagagatatgattttgaa
aacctttctcaaagcgatatcaatgaactgattgatgctaaattggaaaaagaagccaac
cgatatatccagcaatgggaaaaagaaaaaatttccattgaaaacggaagatggggacct
ttcatcaagtttggaaaagcgatgttcaaaattcctaaaaaagcagacgatacaaaatat
gaagctgaggaattgaaagaactttctttagatgaggtgaaaaaatggattacagatcag
gatccgaaagcctttgccgaaaagaaaaaaccagctgccaaaaaagcaacaactacaaag
aaaacaactgcagccaaaaagccggcagccaaaaaaaagtaa
DBGET
integrated database retrieval system
