Chryseobacterium gleum: NCTC11432_03600
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Entry
NCTC11432_03600 CDS
T07042
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cgle
Chryseobacterium gleum
Pathway
cgle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC11432_03600 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgle03021
]
NCTC11432_03600 (rho)
03019 Messenger RNA biogenesis [BR:
cgle03019
]
NCTC11432_03600 (rho)
Transcription machinery [BR:
cgle03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NCTC11432_03600 (rho)
Messenger RNA biogenesis [BR:
cgle03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NCTC11432_03600 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
NACHT
AAA_25
AAA_22
AAA
Rho_N
Mor
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
VEE10025
UniProt:
A0A3S4M8D4
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All DBs
Position
1:3832018..3833832
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AA seq
604 aa
AA seq
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MFNIETLRSKSVTELTKILKDLGVKVARNSNENDKIFAILDFQASNPKVAKDYFNATETA
SITTEEAPAEKPAKAPAKKAAPKKTAAKPKANAKAPVEPDAEEKTEEKVPASEEVKQEEP
KAEAAAVTEEPTATAQAKKKRKRVSANTASSETAQERTEVPKNTESPEPAQAEEKPNNSQ
QPQANRPQKGQNHPQNSGNQHKNQNQHQQHQNQNQNRHSEKAEEQNDPKKEFNFDGLVSI
EGVLEILPDNYGFLRSSDFSYISSPDDVYVSTAQIRNFGLKTGDTVKGIVRLPKEGEKYF
SLLRPTEVNGRDLAFIKDRVAFEYLTPLFPEEKFNLAGSGSTVSTRIVDLFAPIGKGQRA
MIVAQPKTGKTMLLKDIANSIAANHPEVYMMVLLIDERPEEVTDMERSVNAEVIASTFDE
AAEKHVKVANLVLAKAQRMVECGHDVVILLDSITRLARAYNTVTPASGKVLSGGVDANAL
HKPKRFFGAARKIEGGGSLTIIATALIDTGSKMDEVIFEEFKGTGNMELQLDRKIANRRI
YPAIDLVASSTRRDDLLLDEVTSQRMWILRKYLSEMNPVEAMEFVDKNIKGTLNNEEFLM
SMNK
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacatagaaacgttaaggtcaaaatccgtaacggaactgactaaaatcttaaaa
gatttaggcgttaaagttgcaagaaacagcaatgaaaatgacaagatctttgctattctt
gactttcaggcttctaaccctaaagttgcaaaagattatttcaacgccactgaaaccgcc
agtataactactgaagaggctccggcagaaaaacctgccaaagccccggcaaaaaaagct
gccccgaaaaaaacggcagccaagccaaaagcaaatgcaaaagctccggtagaacctgat
gcagaggaaaaaacagaagaaaaggtgccggcttccgaagaagtaaaacaggaagaacca
aaagctgaagctgctgcagtaacagaagaacccacagcaacagcccaggcaaaaaagaaa
agaaaaagagtttctgccaatacagctagttcagaaacagcccaggaaagaacagaagtt
cccaaaaacacagaatccccagagcctgcccaggctgaagaaaagcctaacaattctcaa
caaccacaggctaacagacctcaaaaaggacaaaaccacccacagaacagtggaaaccag
cataaaaaccaaaaccagcaccaacagcaccaaaaccagaatcagaacagacattctgaa
aaggcagaggagcagaacgatcctaaaaaagaatttaatttcgatggattggtaagtatt
gaaggggttttggaaatcctaccggataactacggatttttacgttcctcagatttcagt
tatatctcttctcctgatgatgtgtatgtttctacagcacagatcagaaatttcggtttg
aaaaccggagatacagtgaaaggaattgtaagacttcctaaagaaggggagaaatacttc
tcattattaagacctacagaagttaacggacgtgatcttgcatttatcaaagaccgtgta
gcttttgaatatctgacaccacttttccctgaagaaaaatttaaccttgcgggaagcggt
tctacagtgtccacaagaattgtagatttatttgcacctatcggaaaaggtcagagagca
atgattgttgcacagcctaagacaggtaagacaatgttgcttaaagacattgccaattct
attgcagcgaatcacccggaagtatatatgatggttcttctgatcgatgaacgtccggaa
gaggttactgacatggaaagaagtgtgaatgcagaagtaattgcttctacatttgacgaa
gccgctgaaaaacatgtaaaagtagctaaccttgttcttgcaaaagcacaaagaatggtt
gagtgcggacatgatgtagtcatcttactggactctattacaagactggcaagagcatac
aacaccgtaacacctgcatcaggtaaagttctttccggtggggtagatgcgaatgctctt
cataaaccgaaaagattcttcggagcagcaagaaaaatcgaaggcggagggtctcttaca
attattgctactgcattgattgatacaggatccaaaatggatgaagtaatctttgaagaa
tttaaaggtacaggtaacatggaacttcagctggacagaaaaattgctaacagaagaatt
tatcctgctattgaccttgtagcatcaagcacccgtagagatgatcttcttctggatgaa
gtaacttcacagagaatgtggattcttagaaaatatctttctgagatgaatcctgtagaa
gcaatggaatttgtagataaaaacattaaaggaacccttaataatgaggaattcctgatg
tctatgaataaataa
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