Chryseobacterium gleum: NCTC11432_04018
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Entry
NCTC11432_04018 CDS
T07042
Symbol
sbcC
Name
(GenBank) Nuclease sbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cgle
Chryseobacterium gleum
Brite
KEGG Orthology (KO) [BR:
cgle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgle03400
]
NCTC11432_04018 (sbcC)
DNA repair and recombination proteins [BR:
cgle03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC11432_04018 (sbcC)
Archaeal homologous recombinant proteins
NCTC11432_04018 (sbcC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
VEE10420
UniProt:
A0A3S4M904
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All DBs
Position
1:complement(4280305..4283340)
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AA seq
1011 aa
AA seq
DB search
MIPVQLTIEGLYSYRERQTIDFRNLTEAGLFGIFGAVGSGKSSVLEAISFALYGETERLN
MRDKRAYNMMNLKSNSSYIEFDFVNYENKLFRATRDFKRNSKKFEEVKPNAVTFYENIDG
KWIPLEHSNAEAIIGLSYSNFKRTIIIPQGQFKEFLELGAAERTNMMKEIFNLQKFDLQN
NVSALNVKNRSELDQLEGQLKGFEDINEEKIKIQKEELTEEQKKLSEANKKLEKISQTYQ
QLKNLKSDFESLQLNKEKFSKLSEEKPQMDALEAKAELYDHIFRIFNPLIIEKNKLSKEI
ADKRNEKEQQIKIWQETEKAFTVIKKKLAALEPQFKALEQSKIQENDMNLIVQILKFSEE
IKTLNERTRKGSEKVKEVDLNKENIQKTIDELAVQIKTLKEQKLDSALLSEVGNWFIQQK
NLKKIQQQQVEKVVQQQKQISEIGEELKPFGYHENYKDDFRIRKETLEAKRKELSLKLDH
LKIQKELSRFAAELHDGENCPLCGSKEHPHIVEFHDVNIELQEIQENITTVEQELTAVQK
QESEIEKILDRKKIFEEQLTSEQKTLLRIQKDIEHHILSFTWKQFSHDLEEEFEKKRSDS
FTLEKKIEETERNIALEREALEKENKTLEKYKSALEAFRLEEVSKQEQINISRSGLKILD
WNLYAQKTTSEIEDAYQKLVQSNKETEENYNKASEQEKILSPKLTEQKTIVSQTEKQITE
LEKEISANESAIAKALADQNFTEFKEVENILLQEINIQVVRTQIQNFKIEFEALKKFIGE
LELKLKGLSFDSNQFSLAEQQLTQAQNEQKQISDSVVTKAAEIERLEKEFVKKEELLKAL
AKLQKRSENLKVMMNLFKGAGFVQYVSSIYLRQLCDHANVRFHRMTRNQLSLQLNENNDF
EIIDYLNEGKSRSVKTLSGGQAFQVSLSLALALAESVQANAQADKNFFFIDEGFGTQDTE
SVNIVFETLTNLMKENRIVGIISHVEELKEKIPTALNIIKDEERGSIIEII
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgatccctgttcaattaactatcgaaggactttactcgtaccgggaacgccagaccatt
gatttcagaaatctcactgaggcggggctgtttgggattttcggtgcggttggttccggg
aaatcttcagttcttgaagcaatttcgtttgccttatacggtgaaacggagcgtctgaat
atgcgtgataaaagggcttataacatgatgaatctaaaatcaaacagttcttacatagaa
tttgattttgtgaattatgagaataaactcttccgtgccacccgtgattttaaacgaaac
tccaaaaaattcgaagaggtaaagcctaatgctgttactttttatgaaaatatagatgga
aaatggattcctttggagcactcaaatgcagaagctatcataggtttaagctattccaat
tttaagagaaccatcattattccgcagggacagtttaaagaattccttgagctgggtgcc
gcagaaagaacgaatatgatgaaggaaatttttaaccttcagaaatttgatcttcagaac
aatgtttctgcactcaatgtaaaaaacagatctgaactggatcagcttgaagggcaatta
aaaggctttgaagatatcaatgaagagaaaatcaaaattcagaaagaggaacttacagag
gaacagaaaaaactctcggaagccaataaaaaactggaaaagatttcccagacctatcaa
cagctgaaaaacctgaaaagtgattttgaaagtttgcagctgaataaggaaaaattcagt
aagctctctgaagaaaagcctcaaatggatgctttggaagcaaaagcagaattatatgac
catattttcagaatcttcaatccgctgattattgagaaaaataagctttccaaagaaatt
gctgataaacggaacgagaaagaacagcaaattaaaatatggcaggaaactgaaaaggct
tttactgttataaagaaaaaactcgctgctcttgaaccacaatttaaggcattggagcaa
tcaaaaattcaggaaaatgatatgaacctcatcgttcagatcctgaaattttctgaagaa
ataaagactttaaatgaaagaacccggaaaggctctgaaaaggtaaaagaagtagatctt
aataaggagaatattcaaaaaaccattgatgaacttgccgtacagattaaaactttaaaa
gaacaaaaacttgattcagccttactttctgaagtaggcaactggtttatccaacaaaag
aacttaaaaaaaatacaacagcagcaggttgaaaaagtcgtgcagcagcaaaaacagatt
tcagaaattggtgaggaattaaaaccttttggctatcatgaaaattacaaagacgatttc
agaatcaggaaggaaactttagaagctaaaagaaaagagctttccctaaaactggatcat
cttaaaatacaaaaagagctttcccgttttgccgctgaacttcatgacggcgaaaactgc
cctctctgcggttccaaagaacatccgcatattgtggaatttcatgatgtgaatattgaa
ttacaggagattcaggagaatattacaaccgttgagcaggaattgactgccgttcaaaaa
caggaatccgaaattgagaaaatcctggaccgcaaaaaaatctttgaagaacagcttact
tcagagcaaaaaacgttgctccggattcagaaagatatagagcatcatatcctgagtttc
acctggaagcaattttctcatgatctggaagaggaatttgagaaaaaacgttcagactca
tttacactggagaaaaagattgaagaaacggagcggaatatagcattggaaagagaagcg
ctggaaaaagaaaacaaaacgctggagaaatataagagcgcactagaggctttcaggctg
gaagaagtttcaaaacaggaacagatcaatatcagccgttccggtcttaaaatcctggac
tggaatctgtatgctcaaaaaacgacctcagaaattgaagatgcttatcaaaagctggtg
cagtccaacaaagaaaccgaagaaaattataataaagcatcagagcaggaaaagattctt
tctccaaaactgacagaacaaaaaaccattgtcagccaaactgaaaaacaaattacagaa
ctcgagaaagagatttccgcaaatgaatcagctatagctaaggccttggcagatcaaaat
ttcacagaatttaaagaagttgaaaatattttacttcaggaaattaatattcaggttgtg
agaactcaaattcagaatttcaagattgaatttgaagctttaaagaaattcatcggagaa
ctggaattaaaattgaaaggactttcatttgacagtaaccagttttcgttggctgaacaa
cagcttactcaagcacagaacgagcaaaaacagatcagcgattctgtggtgacaaaggct
gcagaaatagagcgtctggaaaaagagttcgtaaaaaaagaagagctgctgaaggcactt
gcaaagcttcagaaacgttccgaaaatttaaaggtcatgatgaacctgtttaaaggagct
ggttttgtacaatatgtatcatccatttatcttagacagctttgtgatcatgccaatgta
cgtttccacagaatgaccagaaaccagctgagtctgcagcttaatgaaaataatgatttc
gaaatcattgattacctcaacgaagggaaaagcagaagtgtaaaaacgctttcgggagga
caagcttttcaggtatcgttgagtctggctctcgcactggcagaaagtgttcaggccaac
gcgcaggcagataaaaactttttctttatcgatgaaggctttggaacccaggatacggaa
tctgtgaatattgtctttgaaacgcttaccaacctgatgaaagaaaacaggattgtaggt
attatttcgcatgttgaagaactgaaagagaagattcctaccgccctcaatattatcaag
gatgaagaaagaggaagtatcattgaaattatttaa
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