Chryseobacterium gleum: NCTC11432_04501
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Entry
NCTC11432_04501 CDS
T07042
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cgle
Chryseobacterium gleum
Pathway
cgle03030
DNA replication
cgle03410
Base excision repair
cgle03420
Nucleotide excision repair
cgle03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cgle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC11432_04501 (polA)
03410 Base excision repair
NCTC11432_04501 (polA)
03420 Nucleotide excision repair
NCTC11432_04501 (polA)
03440 Homologous recombination
NCTC11432_04501 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgle03032
]
NCTC11432_04501 (polA)
03400 DNA repair and recombination proteins [BR:
cgle03400
]
NCTC11432_04501 (polA)
Enzymes [BR:
cgle01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC11432_04501 (polA)
DNA replication proteins [BR:
cgle03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NCTC11432_04501 (polA)
DNA repair and recombination proteins [BR:
cgle03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NCTC11432_04501 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC11432_04501 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
RNase_H_2
DUF2202
HHH_2
DUF1198
Motif
Other DBs
NCBI-ProteinID:
VEE10877
UniProt:
A0A448B8K4
LinkDB
All DBs
Position
1:4716369..4719203
Genome browser
AA seq
944 aa
AA seq
DB search
MDATQDKRLFLIDAYAMIFRGYYALIRNPRLTSKGLDTSAIFGFTNSLIELIRREKPTHL
AVVFDVGQASVRTDDFSDYKANRSETPEAIKIAVPYIHRILEAMHIPILGVEGYEADDVI
GTIACKAEKEGYTTYMVTPDKDFAQLVTDKIKIYKPGLKGGDIEILGVEEVKAKYEIEDP
KQVIDFLAMMGDAVDNIPGLEGVGEKTAMKFLKEFGTIENLLANTDKLKGKLKEKVEASA
ERGILSKKLATIICDAPVEFHQEQYDLETPDFEKVKEVFDEIEFRRLYENLYRAFAPAPA
ETIVVSEVEVKQTPAGTEVKGQVMQLDLFANFEELEQATSTKSTIEHNDHLYQFINNPKA
QKKLVDNLLQQKVVCFDTETTSLNELEAELVGMSFSYKKGLAYYIPLSEDRAEVLQTLEI
FRPFFEKEDLLKVAHNLKFDYKVLKQYDITVKGAMFDTMIAHYLLNPDGRHGMDYLSEVY
LNYKPVSIETIIGKKGKKQGNFRDADLRTQTDYAAEDADVTFQLYELFAPQLKKENLEEL
FYNIEMPLMEVLAKMELSGISLDEKWLAQESVDLENDLKGLEAKIFELSGEEFNMNSPRQ
LGEILFEKMQLDPKAKKTKTGQYATSEDVLQKLSSKHEIIKHILEYRTYQKLKSTYVDAL
PSQIDKDDNRVHTNFSQTTAATGRLASVNPNLQNIPIRTLRGQQIRGAFVSGEGKKIISA
DYSQIELRLIAEISGEENMIKAFQDGEDIHASTAAKLFKIPLAEVSKTQRSQAKTVNFGI
IYGQGAFALAEQTGLSRTEAKQMIEAYFETYPKLKEYMAEQVNKARQLGYVETILGRKRH
LKDINSNNFVVRGHAERNAVNAPVQGSAADIVKIAMIKIDRELEEQQLKTKMLLQVHDEL
VFEAPADEIESASHLIRTEMENALKTQVPLLVEIGVGDNWLEAH
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaacacaagataaaaggctgtttctcatcgatgcgtatgcgatgattttcaga
ggatattacgcattaatcaggaatccgagactcaccagcaaagggctggatacttctgct
atttttggttttaccaattctttaattgaattgatcaggagagaaaaacctactcatctg
gccgtagtttttgacgtaggacaagctagcgtaagaacggatgatttctctgattataaa
gccaacagaagtgaaactcccgaagcaatcaaaattgctgttccatacatccacagaatt
ctggaggcaatgcatattccaattcttggagtagaaggatatgaagcagatgacgtaata
ggtactattgcctgtaaagcagaaaaagaaggatataccacgtatatggtgacacccgat
aaagactttgcacagctggttacggataaaattaaaatttataagccaggtttaaaagga
ggtgatatcgaaattctcggagtagaagaagtaaaggcaaaatatgaaattgaagaccct
aaacaggttattgattttcttgccatgatgggagatgcggtagataatattccgggactg
gaaggggtaggagaaaaaacggcgatgaagttccttaaagaattcggaaccattgaaaac
ctgttagccaatactgataagctgaaagggaaactgaaggaaaaagtagaagcctccgca
gaacgtggaattttgtctaaaaaactggcaaccattatctgtgatgctcccgtagaattc
catcaggaacaatatgatcttgaaactccggattttgaaaaagtaaaagaagtctttgat
gaaatagaattcagaaggctgtacgaaaacctttacagagcttttgctcctgcgccggca
gaaactattgtcgtaagcgaggtagaagtaaaacagactccggcaggaacagaagttaag
ggacaggtaatgcagcttgacctttttgctaattttgaagagctggagcaggctacttct
acaaaatcaactattgagcataacgatcatctgtatcagtttatcaataatccgaaagct
cagaaaaaacttgtagataatcttttacagcaaaaagtggtttgtttcgatacagaaacc
acttcattgaacgagctggaagctgaattggtaggaatgagcttctcttataaaaaaggg
cttgcctattatattccgctttccgaagaccgggcagaagttttgcagaccctggaaatc
ttcagaccgttttttgaaaaagaagacctgctgaaagtagcacacaatctcaaatttgat
tataaagtcttaaaacaatacgatattacggtgaaaggggccatgtttgataccatgatt
gcccattatctgctgaatccggacggaagacacgggatggattatctttctgaagtgtac
ctgaactacaagcctgtatccattgaaaccatcattggaaaaaaaggtaaaaaacaagga
aacttcagagatgcagatctcagaacccagaccgattatgcggccgaagatgcagatgta
acattccagttgtatgaactttttgcaccacagcttaaaaaagaaaacctggaagaactt
ttctacaatatcgaaatgcctctgatggaagtacttgccaaaatggaactgtctggtatt
tccctggatgaaaaatggctagcacaggaaagtgtagatcttgaaaatgatctgaaagga
ttagaagcaaaaatctttgaactttcaggcgaagagttcaacatgaattcaccaaggcag
ctgggagaaatcctgtttgaaaaaatgcagcttgatccaaaagccaagaaaacaaagacc
gggcagtatgcaacctcggaagatgttcttcagaagctttcttcaaaacatgagatcatc
aaacatattctggagtacagaacttaccagaaattgaaatcaacttatgtagatgcctta
ccgtcgcagatcgataaagacgacaacagagtacataccaatttctcacagactacagcc
gcaacaggccgtttggcgagtgtaaacccaaacctgcagaatatcccgatccgaacgctg
agaggacagcagattcgtggagctttcgtttccggagaaggaaaaaagattatctctgcc
gattattctcagattgaacttcgtcttattgcagaaatttcaggagaagaaaacatgatc
aaagccttccaggatggagaggacattcatgcttccacagccgcgaaactgtttaaaatt
ccattagctgaagtttccaaaacccagagaagccaggccaaaaccgtgaactttgggatc
atctacggtcagggagcttttgcattggcagaacaaactgggctatcccgtacagaagcc
aagcagatgatcgaagcctacttcgagacttatccgaagttgaaggaatacatggcagaa
caggtgaacaaagcacgtcagttaggctatgtagaaacaatattaggcagaaaacgtcat
ttgaaagatatcaattcaaacaactttgtggtgagaggccacgctgaaagaaatgctgta
aatgcaccagttcagggaagtgcagcagatattgttaagattgctatgattaaaattgac
agggaactggaagagcagcagctgaaaacaaaaatgcttcttcaggtccatgacgaattg
gtgtttgaagccccggcggatgaaattgaatctgcttcccatctgatcagaacagaaatg
gaaaatgccttaaaaacacaggttccgttattggtggagattggagtaggggataattgg
ctggaagcccattaa
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