Chryseobacterium gleum: NCTC11432_04727
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Entry
NCTC11432_04727 CDS
T07042
Symbol
rhlE_3
Name
(GenBank) ATP-dependent RNA helicase rhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
cgle
Chryseobacterium gleum
Pathway
cgle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC11432_04727 (rhlE_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgle03019
]
NCTC11432_04727 (rhlE_3)
Enzymes [BR:
cgle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCTC11432_04727 (rhlE_3)
Messenger RNA biogenesis [BR:
cgle03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC11432_04727 (rhlE_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
UvrD-helicase
P-loop_SecA
Flavi_DEAD
Cas3-like_C_2
HEM4
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
VEE11303
UniProt:
A0A3S4N7A1
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All DBs
Position
1:complement(4963527..4964831)
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AA seq
434 aa
AA seq
DB search
MNFTDLNLIEPIAKAIQEQGYTTPTPIQERSIPDILDGRDFLGCAQTGTGKTAAFSIPIL
QNLSKNKIPNKHIKALILTPTRELAIQIEENINAYGKYLPLKQLVIFGGVKQGNQEAALK
KGVDILVATPGRLLDFIAQGIISLKNLEIFVLDEADRMLDMGFVHDVKRVIKLLPQRRQT
LFFSATMPGEIQKLANSILNNPVKVEVTPVSSTADTIKQSVYFVEKDNKLNLLSHILKND
ISDSVLVFARTKHGADKISRKLQKDNISAEAIHGNKSQNARQNALNNFKSGKTRVLVATD
IAARGIDIDELKFVINFELSDVSETYVHRIGRTGRAGAEGTSISFVDGLDLLNLKNTEKL
IGKKIPVVKDHPFHTDDLVAQKRDSNNKPVPAGGEKPKASNNNNSRSGKNRKKPSPTASV
GFKKPKNKNFTRKK
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
ttgaattttacagacttaaacttaatagaacctattgcaaaagcaattcaggagcagggt
tacacgactcctactcctatccaggaaagatctattcctgatatattagacggcagagac
tttttaggctgcgcacagacaggaacaggtaaaacagcggctttttctattcctattcta
cagaatttatccaaaaataaaattcccaataaacatataaaagcattaattcttactccc
accagagaactggccattcagattgaggaaaatattaatgcttatggtaaatatcttccg
ttaaagcaacttgttattttcggaggagtaaaacaaggaaatcaggaagctgcattgaaa
aaaggagttgatattctggtagcaacaccgggaagactcttagacttcattgcacaggga
atcatcagcctgaaaaatcttgaaatctttgtactggatgaagcagacagaatgctggac
atgggatttgtacacgatgtaaaaagagtcattaaacttttacctcagagaagacagact
ttattcttttcagcaacaatgccgggtgaaattcagaagctggctaactcaattctgaat
aatcctgtaaaagtagaggtaactccggtttcatctacagcagatactatcaaacaatct
gtatattttgtagaaaaagataataaactgaatctgctttctcatattctgaaaaatgat
atttcagattctgtattggtttttgccagaacgaagcacggtgcggataagatttccaga
aaattacagaaagacaatatttctgcagaagctatccacggcaacaagtcccagaacgca
agacagaatgctctgaataactttaaatccggtaaaacaagagttctggtagcaacggat
attgcagccagaggaattgatattgatgaactgaaattcgtaatcaattttgagctttcc
gatgtttctgaaacctatgtacaccgaatcggaagaacaggaagagccggagctgaaggc
acctctatttcttttgtagacggccttgatcttttaaacttaaagaacacagaaaagctg
attgggaagaaaatccccgtggttaaagaccatcctttccatacggatgatctggttgca
cagaagagagattccaataacaaaccagttcctgccgggggtgaaaaacctaaagcaagc
aacaataataattcaagatcaggtaaaaaccgtaaaaagccttcaccaacggcttcagta
ggatttaaaaaacctaagaataagaatttcaccagaaagaaataa
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