Cotesia glomerata: 123258784
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Entry
123258784 CDS
T07738
Name
(RefSeq) 3'-5' RNA helicase YTHDC2-like
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
cglo
Cotesia glomerata
Brite
KEGG Orthology (KO) [BR:
cglo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cglo03041
]
123258784
Enzymes [BR:
cglo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123258784
Spliceosome [BR:
cglo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
123258784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HA2_C
OB_NTP_bind
Helicase_C
R3H
DEAD
Ank_2
AAA_22
AAA_19
HA2_N
nSTAND3
Ank
ATPase
PhoH
Ank_5
AAA_23
AAA_16
T2SSE
NPHP3_N
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
123258784
NCBI-ProteinID:
XP_044574930
LinkDB
All DBs
Position
LG2:1740140..1750936
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AA seq
1154 aa
AA seq
DB search
MPRRKNNHWKPVIGEDTRIAVNLCVKKLIESPDLKELEFPSSYTAEERAYVHSLVQELGL
KSKSRGKGANRFLTVYKREGSTIIQSDPVLKIQKTSKQGIFNLIQKFPINSKERQDLLPP
TERERTVDNEVIVNAKAMGRLNNSIPQVPQLRTNQDLVNFRKSLPVYSSREKILDALSSS
QVVVIAGETGSGKTTQVPQYILENCQQRNQVCRIICTQPRRLSAVSIAERVAYERDEKIG
QTFGYQIRLESRVAPKTLLTYCTNGVLLRTLMGGDSALATVTHIIVDEVHERDRFCDFLL
IALKDALVKYRALKLILMSATMDTNIFSKYFTQCTVINISGRSFDVDTYYLQDILKMTGY
MTKEMSSKRKELLNKKDQRKVLESWTQCPPQQTNTHLQSHKNVLPSPILGQQSDSVPEKI
ELEPWLAEEMDKSICDAWLIGGEDNFTQLLHLILSENISVDYQHSITRVTPLMVAAGRGS
INTTEQLLNLGANLTIRASNEWTALDWARKMNQVECTELIEAYMKTYDCNLDDQHETQQD
APLTEEEKLILDIYHNTFNDDNVDYDLLLLLIFHIHSSMSAGSILVFLPGYDDIVTMREK
ISNEEKRCLGLKINLFVLHSNMQMSDQKRLFRPCAPGTRKIILSTNIAETSITIDDVVFV
IDSGKVKEKSFDAISNVCTLKSNWISQACAKQRKGRAGRCQKGICYRLYSSVRYNSMQPY
QTPEILRLPLQELCLFTKHLAPGNTPIAEFLERALEPPSNMITRNAVQLLKSIDALDAWE
DLTELGTHLLDLPVEPRLGKMLLYAVVLKCLDPILTIVCSLAYKDPFVLPHQPCQKRAAT
AARKKFAADTYSDHMAVLRAFQAWQQARASGWERQFCDKNFISSAVMEMIVGMRTQMLGQ
LRASGFVRARGAGDIRDLNLNSENWAVVKAALTAGLYPNLIRVDREYGQLRTQKESRVFL
HPSSTLRDFSKSARTTSAQSHAAGVTGLPSDWLVYEEMSRSGRFCHVKTVTLVNPVTIAL
FSGPARLPMDLIYDTETVPESESDSEAEDSREGMTILKLDDWIAMKVDYETARLVLYLRQ
KWNALFLRRMKTPNKNMTQLDELVIKAVVSIISNEEHACELQQPAGIGQRPRPLIVDYYP
ANARRTDDEDKFLN
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgccaagacgtaaaaacaatcattggaagccggtgataggagaagacacgcgtattgct
gttaatttgtgtgtaaaaaaattgatagaatcgccggatttgaaggaacttgaatttcca
tcatcctacactgctgaagaaagagcttatgttcatagtttagtacaagagttgggtctc
aaatccaaaagtcgaggaaaaggagcaaatcgttttttaacagtgtataaaagagaagga
tcaacaattattcagtcggacccagtgttaaaaattcaaaaaacatcgaagcaaggaatt
tttaatttaatacaaaagtttcctatcaacagtaaggaacgtcaagatttattaccacca
actgaacgtgaacgaactgttgacaatgaagtaatcgtaaacgcaaaagcgatgggccgc
ctgaacaacagcatccctcaagtgcctcaactgcgcacgaaccaagacctcgtaaatttc
cgcaagagtctcccagtctacagctctcgtgaaaaaatccttgacgccctatcatccagc
caagtagtcgtaatagccggggaaacaggttccggcaaaaccacccaagtcccgcagtac
atcctcgagaactgccaacagcgcaaccaagtctgccgaataatctgcacccagccccgc
cgtctatccgcagtctccatcgctgaacgcgtcgcttacgagcgtgacgagaaaatcggc
cagaccttcgggtaccaaatccgcttagaaagccgcgtggctcccaaaactctcttaact
tactgcaccaacggcgtgttactccgcactctaatgggcggcgactccgccctagcaaca
gtgacccacataatcgtcgacgaggtccacgagcgtgacagattctgcgattttttacta
atagccctaaaagacgctctagtaaaataccgagctttaaaattaatcctcatgagcgcc
acaatggacacaaacattttctcaaaatactttactcagtgcactgtaataaacatcagc
gggcgtagtttcgacgtggacacttactaccttcaagatattttaaaaatgaccggctat
atgaccaaagaaatgtcttctaaacgcaaagaattgctaaataaaaaagaccagcgcaaa
gttttagaatcttggacccagtgtcctcctcagcagacaaatactcaccttcagtcccac
aaaaatgtcctaccatctccaatattaggccagcagagcgactcagtccccgaaaaaata
gaattagaaccctggctggcggaagaaatggacaaaagcatctgcgacgcgtggctcatc
ggcggagaggacaatttcactcaactgctacatttaattttatcagaaaatatttctgta
gattatcagcactcgataactcgcgtaacaccgctaatggtcgccgcaggccgcgggtca
ataaacacaaccgagcaattgctgaacctcggcgcaaacttgaccatcagagcgagtaat
gagtggactgctttggactgggcgagaaaaatgaaccaagttgagtgcactgagttaata
gaagcctacatgaagacctacgattgcaatcttgatgaccagcacgagactcagcaagac
gctcctttaaccgaagaggagaaattaatccttgatatttaccacaacacttttaatgat
gataatgtagactacgacctcttgctgttgcttatttttcatattcactcttcaatgtcc
gcggggtcgatcttagtttttttaccgggctacgacgacatcgtaacgatgagagaaaag
atttctaatgaagaaaaaaggtgtcttgggttgaaaattaatttatttgttctgcactct
aatatgcagatgagcgaccagaagcgcttgttcagaccttgtgcgcctggaacgagaaaa
ataattctttctactaatattgcggagactagtatcactattgatgatgttgtctttgtg
atagactcggggaaggttaaggaaaagtcttttgatgcgattagcaatgtgtgcacgctt
aagtcaaactggatttctcaggcgtgtgcgaagcagagaaagggaagagctgggaggtgc
cagaagggaatttgttaccggctttattcttcagtaagatataatagcatgcagccgtat
cagactccggagattctgaggctgccgcttcaggaactgtgtttgtttaccaagcacttg
gctccgggaaacactccaattgcggagttcctggaacgcgctttggaaccgccgtcgaat
atgatcactaggaacgcggtgcagttgctgaagtctattgatgctttggacgcttgggaa
gatcttacggagctggggactcatcttctggacctgccggtggaaccgaggttggggaag
atgctactctatgcggtggtcttgaagtgtctggatccgattctgacaattgtttgcagt
ctggcttataaggacccgtttgtgctgccgcaccagccttgtcagaagcgagcagctacc
gctgcacgcaagaaatttgctgctgatacttacagcgatcacatggcggtgctcagagcg
ttccaagcttggcagcaggcaagagccagtgggtgggaaagacaattttgtgataagaat
tttatttcttcggctgttatggagatgattgttggaatgaggacccagatgttgggacaa
ttaagagcttctgggtttgttagagctagaggcgctggcgatattcgtgatcttaatttg
aactctgaaaattgggctgtggttaaagctgcgctcactgcggggttgtatcccaatttg
atacgtgttgatcgagaatatggacaactgaggactcagaaagagtctagagttttcttg
catccttcttcgacactgagagatttttctaagtcagctagaactacttctgcacagtct
cacgctgctggggttacaggactgccctcggattggctggtttatgaagaaatgagtcgc
tcaggaaggttctgtcacgtcaagactgttactttggtcaatccggtgactattgcgctt
tttagtggacctgcgagattacctatggatcttatttatgacactgaaacggtacctgag
agcgaatcagactccgaggcggaggacagtagggagggaatgactattttgaagctcgat
gattggatcgcgatgaaagttgattatgagactgcgaggctggtgctttatttgagacag
aagtggaacgctttgtttctcaggaggatgaagacgccgaataaaaatatgacgcagttg
gatgaactggtgatcaaggctgttgtgtcgattattagtaatgaggagcatgcttgtgag
cttcagcaaccggcggggattgggcaacgacctagacctttgattgtcgattattatcct
gctaatgctcgtaggactgatgatgaggataaattcctgaactaa
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