Cotesia glomerata: 123258803
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Entry
123258803 CDS
T07738
Name
(RefSeq) ATP-dependent RNA helicase p62-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cglo
Cotesia glomerata
Pathway
cglo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cglo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123258803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cglo03041
]
123258803
03009 Ribosome biogenesis [BR:
cglo03009
]
123258803
Enzymes [BR:
cglo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123258803
Spliceosome [BR:
cglo03041
]
Complex A
U1 snRNP components
U1 related factors
123258803
Complex B
123258803
Ribosome biogenesis [BR:
cglo03009
]
Eukaryotic type
Pre-60S particles
Helicases
123258803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_30
ERCC3_RAD25_C
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
123258803
NCBI-ProteinID:
XP_044574960
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All DBs
Position
LG2:complement(31261345..31266879)
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AA seq
561 aa
AA seq
DB search
MTYSGASSGGGGGGFRSGGAGKGGAAQRSSGPPRNGFGGGGGGNRFGGARGGNTGGSNGR
FGNRGNSNNPKTAGNTLKKPNWDYENLKPFKKDFYIPHSNVSQRNYREIDSFRLEKEITL
KGEEIPDPIQSFDEGNFPDYVMEGIKRQGFTEPTAIQSQGWPIAMSGRNMVGIAQTGSGK
TLGYILPAIVHINNQQPLNRGDGPIALVLAPTRELAQQIQTVANDFGSLSYVRNTCIFGG
APKGSQARDLERGVEIVIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRK
IIEQIRPDRQVLMWSATWPKEVRMLAEEYLVDYTQLNIGSLSLCANHNILQIVDVCQEHE
KETKLGSLLQEIGNVNDDGGKTIIFVETKKKVENITRNIRRYGWPAVCMHGDKSQQERDY
VLREFRNKKGSILVATDVAARGLDVDDVKYVINFDYPSSSEDYIHRIGRTGRSQATGTSY
AFFTPQNSRQAKDLINVLKEANQVINPKLSELASKSGGHGGGYGQRSRWGYGGGRGGGRE
NNFSGVHKRFEDRSNNYNNYS
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgacttacagtggtgcatcgtctggtggtggtggtggtggattccgtagtggtggagca
ggaaaaggcggagctgctcagcgtagcagcggaccgccgcgcaatggcttcggcggcggt
ggaggtggtaataggttcggcggagcacgaggtggaaacactggtggatccaatggccgc
tttggaaaccgtgggaactcaaacaaccctaaaactgcaggcaacacccttaaaaaaccc
aactgggattacgaaaatctgaaacctttcaagaaagatttctacatcccacattcaaac
gtttcccagcgaaactaccgcgagatcgattctttccgactagaaaaagaaattaccctt
aagggagaggaaattccagacccaatccagtctttcgacgaaggaaacttcccggattac
gtaatggagggaattaagagacaagggttcaccgagccgacggctattcagtcccaaggt
tggcccattgcgatgtccggccgcaacatggtcggtattgctcaaacaggatcaggaaag
acgcttggatacatcttgcctgctatcgttcacatcaacaaccagcaacctctgaaccgt
ggagacggacccatcgctctggtacttgcacccaccagagaattggcccagcagatccaa
acagtcgccaatgattttggatctctgtcttatgtaaggaacacatgcattttcggggga
gctcccaagggcagccaagctcgtgacctggaacgtggtgttgagattgttattgccaca
cctggaaggcttattgatttcctcgagcgcggcaccaccaatctgcgcagatgcacgtac
ttggtactcgatgaggctgaccgtatgttggacatgggattcgaaccacaaattagaaaa
attatcgagcaaatcagacctgacagacaagtacttatgtggtctgctacttggccaaag
gaagtcagaatgttggctgaggaatatctcgttgactacacccaattgaatattggatct
ctctcgctctgtgcgaaccacaacattctccaaattgttgatgtatgccaagaacatgaa
aaagaaacaaaattaggatctttgctccaagaaattggtaatgttaatgatgacggtgga
aaaacaattatcttcgtagaaactaagaaaaaagttgaaaatattactagaaacataaga
agatacggctggcctgccgtgtgtatgcacggagacaaatcacagcaagaacgtgattat
gttcttagagaattcagaaacaagaaaggttcaattcttgtagcaacagacgttgctgct
cgtggacttgatgtcgatgatgttaagtatgtgatcaacttcgactatccttcctcgtcg
gaggattacattcatagaattggaagaactggacggtctcaagccactggaacgagttac
gctttctttacgccacaaaacagtcgacaagctaaagatttaataaacgtactcaaagaa
gctaaccaagtcatcaaccccaagctgtccgagctcgctagtaaatccgggggacatgga
ggtggatacggacaaagaagtcgttggggctacggtggaggacgtggaggtggacgggag
aacaacttctccggagtacacaaaagattcgaagacagaagcaacaactacaacaactac
agttga
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