Cotesia glomerata: 123259232
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Entry
123259232 CDS
T07738
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
cglo
Cotesia glomerata
Pathway
cglo03013
Nucleocytoplasmic transport
cglo03015
mRNA surveillance pathway
cglo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cglo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123259232
09122 Translation
03013 Nucleocytoplasmic transport
123259232
03015 mRNA surveillance pathway
123259232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cglo03019
]
123259232
03041 Spliceosome [BR:
cglo03041
]
123259232
Enzymes [BR:
cglo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123259232
Messenger RNA biogenesis [BR:
cglo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123259232
Spliceosome [BR:
cglo03041
]
Complex C
Other components
EJC/TREX
123259232
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
123259232
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
123259232
NCBI-ProteinID:
XP_044575511
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All DBs
Position
LG1:complement(36960501..36964944)
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AA seq
424 aa
AA seq
DB search
MADNDDLLDYEDEEQTEAVVDGSGDAPAKKEVKGTYVSIHSSGFRDFLLKPEILRAIVDC
GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLELTENQVYVLVMCHTR
ELAFQISKEYERFSKYMPQVKVGVFFGGLPIQKDEEVLKNTCPHIVVGTPGRILALVRNK
KLNLKHLKHFILDECDKMLELLDMRRDVQEIFRSTPHGKQVMMFSATLSKDIRPVCKKFM
QDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMAL
AQLLTEQNFPAIGIHRGMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYD
MPEDSDTYLHRVARAGRFGTKGLAITLVSDESDAKILNDVQERFDVNITELPDEIDLASY
IEGR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggctgataacgatgatcttttggactacgaagacgaggaacagaccgaggcggtagtc
gacggaagtggagatgcaccggccaaaaaagaagtcaagggtacctacgtttctattcac
agcagtggtttcagagatttcctgctaaaaccagaaattctcagagctattgttgattgc
ggtttcgagcatccatccgaagttcaacacgaatgtattccacaagctgtactcggtatg
gatattctctgccaagctaaatccggtatgggaaaaacggctgtatttgtattggcaact
ctacaacagcttgagctaacagagaatcaagtgtacgtgttggtaatgtgccacacacgt
gaattagcattccaaatcagtaaagagtacgagcggttcagcaaatacatgccccaagtc
aaggttggtgtattctttggtggacttccaatccaaaaagatgaagaagtattaaaaaat
acctgccctcacatcgtggtaggaacaccgggacgtattctggcacttgtacggaataag
aagcttaaccttaagcacttgaaacattttattctcgatgaatgtgacaaaatgctcgaa
ttgcttgatatgagacgagacgtacaagaaatcttccgtagcactccacatggcaagcaa
gtaatgatgttcagcgcaacattatcgaaggatattcgaccagtctgcaaaaaattcatg
caagatcctatggaagtttacgtcgacgacgaagccaaactcacacttcacggtctccag
cagcactacgtcaagctgaaggaaaatgaaaagaataaaaaactctttgaacttcttgat
gtgctcgaatttaaccaagttgttatttttgttaaatctgtgcaaaggtgtatggcatta
gcacaattattgacagaacaaaatttcccagcaattggtatccacagaggaatgactcaa
gaagagcgtttatcgaggtatcaacagttcaaggatttccaaaagagaattttggttgct
accaatttgtttggacgtggtatggatattgaacgagtaaacatcgtcttcaactacgac
atgcctgaagactccgatacgtatttacatcgagtagcacgagcaggacgtttcggtacc
aaaggtcttgcaataacgttagttagtgacgagagcgacgctaaaatattgaatgacgtt
caagaaagattcgacgtgaacattacggagttaccagacgaaattgatttggcatcttac
attgaaggccgataa
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