Cotesia glomerata: 123260045
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Entry
123260045 CDS
T07738
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
cglo
Cotesia glomerata
Pathway
cglo03013
Nucleocytoplasmic transport
cglo03015
mRNA surveillance pathway
cglo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cglo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123260045
09122 Translation
03013 Nucleocytoplasmic transport
123260045
03015 mRNA surveillance pathway
123260045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cglo03019
]
123260045
03041 Spliceosome [BR:
cglo03041
]
123260045
03009 Ribosome biogenesis [BR:
cglo03009
]
123260045
03012 Translation factors [BR:
cglo03012
]
123260045
Enzymes [BR:
cglo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123260045
Messenger RNA biogenesis [BR:
cglo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123260045
mRNA cycle factors
Stress granule specific factors
123260045
Spliceosome [BR:
cglo03041
]
Complex C
Other components
EJC/TREX
123260045
Ribosome biogenesis [BR:
cglo03009
]
Eukaryotic type
90S particles
Helicases
123260045
Translation factors [BR:
cglo03012
]
Eukaryotic type
Initiation factors
eIF-4
123260045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
UvrD-helicase
AAA_30
AAA_22
TniB
Utp25_C
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
123260045
NCBI-ProteinID:
XP_044576913
LinkDB
All DBs
Position
LG1:complement(36104748..36110617)
Genome browser
AA seq
403 aa
AA seq
DB search
MAEGKARRVAQTEDLSNVEFETSEDVEVINTFDNMGLRDELLRGIYAYGFERPSAIQQRS
IKPMMKGRDVIAQAQSGTGKTATFSIAILQSLDTQIRETQVLVLSPTRELAVQIQKVILA
LGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIKRRTLRTRAIKMLVLDE
SDEMLNKGFKEQIYDVYRYLPPATQVVLVSATLPHEILEMTSKFMTDPIRILVKRDELTL
EGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVCSMH
GDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRS
GRFGRKGVSINFVKTDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggaaaagcaagacgtgttgcccaaacagaagatttatcaaacgttgaattt
gaaaccagtgaagatgttgaagttatcaatacgtttgataatatgggactgcgtgatgaa
ttattacgtgggatttacgcttacggttttgaaagaccatctgctattcaacagaggtcc
ataaaacctatgatgaaaggccgagatgtgatagcacaagctcaatccggtactggtaaa
actgcaactttctctattgccattctccagtccctggacactcaaatccgggaaacacaa
gtcctagttctctcgccgactcgtgagttagcggttcagatccagaaggtaattcttgct
ctaggagattttatgaatgtccagtgtcatgcttgtattggtgggactaacctcggagag
gatatcaggaagttggattatggacaacacgttgtctctggaactcctgggcgtgttttt
gatatgatcaagaggcgaacactcagaaccagagccataaagatgctagtacttgacgag
tctgatgaaatgttaaacaagggatttaaggaacaaatttacgatgtgtatcgttattta
cctccagcgacacaagttgtgcttgtatctgctacgttaccacacgaaattcttgaaatg
acttccaagtttatgactgatcctattcgtattctcgttaaacgtgatgagttgacactc
gaaggaataaagcaattcttcgtagcagtagaacgtgaggaatggaagtttgatacattg
tgtgatttatatgacacattgaccattacccaggctgttattttctgcaatactaaacgc
aaggtcgactggcttacagagaagatgcgagaggctaattttacagtttgttcaatgcat
ggagatatgcctcagaaagagcgtgataacattatgaaagaattcagatctggacagagc
cgtgttttaattacaacagacgtctgggcacgtggtattgatgttcaacaagtatcatta
gttataaattacgacttgcccaacaaccgtgagttatacatccaccgaataggcagatca
ggtcgttttggacgtaaaggtgtctctataaactttgtcaagactgacgacattcgtatt
ctccgggatattgaacaatattattcaacgcaaattgatgaaatgccgatgaacgtcgct
gatttaatttaa
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